About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42858HL07962P-RELATED
Paelopatides42859-
Paelopatides42860DNA-DIRECTED RNA POLYMERASE II, III
Paelopatides42861PROTEIN CROWDED NUCLEI 4
Paelopatides42862REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42863-
Paelopatides42864-
Paelopatides42865GAG-RELATED PROTEIN
Paelopatides42866CYTOSOLIC REGULATOR PIANISSIMO
Paelopatides42867-
Paelopatides42868GLYCOSYL HYDROLASE-RELATED
Paelopatides42869TAL1 SCL INTERRUPTING LOCUS
Paelopatides42870-
Paelopatides42871-
Paelopatides42872TAL1 SCL INTERRUPTING LOCUS
Paelopatides42873ANKYRIN REPEAT FAMILY PROTEIN
Paelopatides42874ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides42875DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides42876REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides42877FAS-ASSOCIATED PROTEIN
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