About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

<< First 1996 1997 1998 1999 2000 2001 2002 2003 2004 2005 Forward> Last>>        2877 pages in total

Gene IDDescription
Paelopatides42838DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides42839DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides42840-
Paelopatides42841DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides42842-
Paelopatides42843SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides42844-
Paelopatides42845HOMEODOMAIN-ONLY PROTEIN
Paelopatides42846CARBOHYDRATE SULFOTRANSFERASE
Paelopatides42847INTEGRIN ALPHA REPEAT DOMAIN-CONTAINING
Paelopatides42848CGI-12 PROTEIN-RELATED
Paelopatides42849PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
Paelopatides42850PKSB
Paelopatides42851RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides42852-
Paelopatides42853UPF0692 PROTEIN C19ORF54
Paelopatides42854STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Paelopatides42855DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Paelopatides42856HL07962P-RELATED
Paelopatides42857-
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