Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00010510 | |
| SKAU_T00010520 | PROTEIN MAX MYC-ASSOCIATED FACTOR X |
| SKAU_T00010530 | BCL7 RELATED |
| SKAU_T00010540 | WD-40 REPEAT PROTEIN |
| SKAU_T00010550 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 |
| SKAU_T00010560 | |
| SKAU_T00010570 | RAB GDP/GTP EXCHANGE FACTOR |
| SKAU_T00010580 | TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED |
| SKAU_T00010590 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00010600 | VESICLE PROTEIN SORTING-ASSOCIATED |
| SKAU_T00010610 | |
| SKAU_T00010620 | RABPHILIN, ISOFORM A |
| SKAU_T00010630 | RH14732P |
| SKAU_T00010640 | E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED |
| SKAU_T00010650 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| SKAU_T00010660 | LD24721P |
| SKAU_T00010670 | |
| SKAU_T00010680 | |
| SKAU_T00010690 | |
| SKAU_T00010700 | |
| SKAU_T00010710 | |
| SKAU_T00010720 | |
| SKAU_T00010730 | |
| SKAU_T00010740 | |
| SKAU_T00010750 | |
| SKAU_T00010760 | |
| SKAU_T00010770 | |
| SKAU_T00010780 | |
| SKAU_T00010790 | |
| SKAU_T00010800 | |
| SKAU_T00010810 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 21 |
| SKAU_T00010820 | N-TERMINAL ACETYLTRANSFERASE-RELATED |
| SKAU_T00010830 | |
| SKAU_T00010840 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| SKAU_T00010850 | |
| SKAU_T00010860 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G12880)-RELATED |
| SKAU_T00010870 | ALDEHYDE DEHYDROGENASE-RELATED |
| SKAU_T00010880 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00010890 | ATAXIN 2-RELATED |
| SKAU_T00010900 | SH2B ADAPTER PROTEIN |
| SKAU_T00010910 | |
| SKAU_T00010920 | |
| SKAU_T00010930 | SESQUIPEDALIAN |
| SKAU_T00010940 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00010950 | UNCHARACTERIZED |
| SKAU_T00010960 | |
| SKAU_T00010970 | SPERMATID WD-REPEAT PROTEIN |
| SKAU_T00010980 | SERINE/THREONINE PROTEIN KINASE |
| SKAU_T00010990 | AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED |
| SKAU_T00011000 | ACETYL-COA C-ACYLTRANSFERASE |
