Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00011510 | FORKHEAD BOX PROTEIN |
| SKAU_T00011520 | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER |
| SKAU_T00011530 | UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER |
| SKAU_T00011540 | AGAP007712-PA |
| SKAU_T00011550 | KELCH PROTEIN |
| SKAU_T00011560 | |
| SKAU_T00011570 | UNCHARACTERIZED |
| SKAU_T00011580 | UNCHARACTERIZED |
| SKAU_T00011590 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
| SKAU_T00011600 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 31-RELATED |
| SKAU_T00011610 | 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE |
| SKAU_T00011620 | |
| SKAU_T00011630 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| SKAU_T00011640 | DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER |
| SKAU_T00011650 | |
| SKAU_T00011660 | ANKYRIN REPEAT AND DEATH DOMAIN-CONTAINING PROTEIN |
| SKAU_T00011670 | CENTROSOMAL PROTEIN POC5 |
| SKAU_T00011680 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
| SKAU_T00011690 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| SKAU_T00011700 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00011710 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00011720 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00011730 | CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN |
| SKAU_T00011740 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00011750 | HOMEOBOX PROTEIN ORTHOPEDIA |
| SKAU_T00011760 | TUBULIN-SPECIFIC CHAPERONE A |
| SKAU_T00011770 | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP |
| SKAU_T00011780 | |
| SKAU_T00011790 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| SKAU_T00011800 | |
| SKAU_T00011810 | |
| SKAU_T00011820 | BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1 |
| SKAU_T00011830 | BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1 |
| SKAU_T00011840 | P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED |
| SKAU_T00011850 | HOMER |
| SKAU_T00011860 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00011870 | |
| SKAU_T00011880 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00011890 | METAXIN RELATED |
| SKAU_T00011900 | THROMBOSPONDIN |
| SKAU_T00011910 | SERINE INCORPORATOR |
| SKAU_T00011920 | CELL DIVISION PROTEIN KINASE |
| SKAU_T00011930 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| SKAU_T00011940 | UREA TRANSPORTER |
| SKAU_T00011950 | PROTEASE M1 ZINC METALLOPROTEASE |
| SKAU_T00011960 | PROTEASE M1 ZINC METALLOPROTEASE |
| SKAU_T00011970 | PROTEASE M1 ZINC METALLOPROTEASE |
| SKAU_T00011980 | PRE T-CELL ANTIGEN RECEPTOR ALPHA |
| SKAU_T00011990 | RGM DOMAIN FAMILY MEMBER DRAG-1 |
| SKAU_T00012000 |
