The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000028l.69 | SOLUTE CARRIER FAMILY 39 |
PMEG.utg000028l.7 | ADENOSINE DEAMINASE |
PMEG.utg000028l.70 | ADP RIBOSYLATION FACTOR-RELATED |
PMEG.utg000028l.71 | TRNA METHYLTRANSFERASE |
PMEG.utg000028l.72 | OVOCHYMASE-RELATED |
PMEG.utg000028l.73 | DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS |
PMEG.utg000028l.74 | ABC TRANSPORTER G FAMILY MEMBER 28 |
PMEG.utg000028l.75 | FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN |
PMEG.utg000028l.76 | FATTY ACID ACYL TRANSFERASE-RELATED |
PMEG.utg000028l.77 | FATTY ACID ACYL TRANSFERASE-RELATED |
PMEG.utg000028l.78 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
PMEG.utg000028l.79 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
PMEG.utg000028l.8 | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE |
PMEG.utg000028l.80 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
PMEG.utg000028l.81 | RTDR1 |
PMEG.utg000028l.82 | SODIUM CHANNEL MODIFIER 1 |
PMEG.utg000028l.83 | CCR4-NOT TRANSCRIPTION COMPLEX RELATED |
PMEG.utg000028l.84 | GH11727P |
PMEG.utg000028l.85 | CONDENSIN-2 COMPLEX SUBUNIT H2 |
PMEG.utg000028l.86 | LIPASE MATURATION FACTOR |
PMEG.utg000028l.87 | LIPASE MATURATION FACTOR |
PMEG.utg000028l.88 | XLR/SCP3/FAM9 |
PMEG.utg000028l.89 | PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO |
PMEG.utg000028l.9 | DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED |
PMEG.utg000028l.90 | PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED |
PMEG.utg000028l.91 | |
PMEG.utg000028l.92 | SYNEMBRYN |
PMEG.utg000028l.93 | FORMIN-BINDING PROTEIN 4 |
PMEG.utg000028l.94 | SENTRIN/SUMO-SPECIFIC PROTEASE |
PMEG.utg000028l.95 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000028l.96 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
PMEG.utg000028l.97 | V-TYPE PROTON ATPASE SUBUNIT C |
PMEG.utg000028l.98 | |
PMEG.utg000028l.99 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
PMEG.utg000029l.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
PMEG.utg000029l.10 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
PMEG.utg000029l.11 | POLYCYSTIN FAMILY MEMBER |
PMEG.utg000029l.12 | O-ACYLTRANSFERASE |
PMEG.utg000029l.13 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000029l.14 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000029l.15 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000029l.16 | ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN |
PMEG.utg000029l.17 | ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL |
PMEG.utg000029l.18 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING |
PMEG.utg000029l.19 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING |
PMEG.utg000029l.2 | CASPASE |
PMEG.utg000029l.20 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
PMEG.utg000029l.21 | FAS-ASSOCIATED PROTEIN |
PMEG.utg000029l.22 | S-ADENOSYLMETHIONINE SYNTHETASE |
PMEG.utg000029l.3 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |