The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000029l.4 | |
| PMEG.utg000029l.5 | DIACYLGLYCEROL KINASE |
| PMEG.utg000029l.6 | METEORIN-LIKE PROTEIN |
| PMEG.utg000029l.7 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
| PMEG.utg000029l.8 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| PMEG.utg000029l.9 | UPF0561 PROTEIN C2ORF68 |
| PMEG.utg000030l.1 | ORGANIC ANION TRANSPORTER |
| PMEG.utg000030l.2 | PROTON CHANNEL OTOP |
| PMEG.utg000030l.3 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B |
| PMEG.utg000030l.4 | UNCHARACTERIZED |
| PMEG.utg000031l.1 | VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL |
| PMEG.utg000031l.2 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
| PMEG.utg000031l.3 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
| PMEG.utg000031l.4 | MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000031l.5 | RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOG |
| PMEG.utg000031l.6 | CULLIN |
| PMEG.utg000031l.7 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
| PMEG.utg000031l.8 | DUAL SPECIFICITY PROTEIN PHOSPHATASE 19 |
| PMEG.utg000031l.9 | |
| PMEG.utg000032l.1 | SUGAR KINASE |
| PMEG.utg000032l.2 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| PMEG.utg000032l.3 | SORTING NEXIN-29-RELATED |
| PMEG.utg000032l.4 | UNCHARACTERIZED |
| PMEG.utg000032l.5 | AP-5 COMPLEX SUBUNIT MU-1 |
| PMEG.utg000032l.6 | |
| PMEG.utg000032l.7 | |
| PMEG.utg000032l.8 | UNCHARACTERIZED |
| PMEG.utg000032l.9 | CB1 CANNABINOID RECEPTOR-INTERACTING PROTEIN 1 |
| PMEG.utg000033l.1 | |
| PMEG.utg000033l.2 | NEPHROCYSTIN-4 |
| PMEG.utg000033l.3 | NEPHROCYSTIN-4 |
| PMEG.utg000033l.4 | TMEM26 PROTEIN |
| PMEG.utg000033l.5 | PROTEIN AF-9 HOMOLOG |
| PMEG.utg000033l.6 | |
| PMEG.utg000033l.7 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000033l.8 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000033l.9 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| PMEG.utg000034l.1 | |
| PMEG.utg000034l.2 | VOLTAGE-GATED POTASSIUM CHANNEL |
| PMEG.utg000034l.3 | TEKTIN |
| PMEG.utg000034l.4 | NUCLEOPROTEIN TPR-RELATED |
| PMEG.utg000035l.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000035l.2 | |
| PMEG.utg000035l.3 | SORTING NEXIN |
| PMEG.utg000036l.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| PMEG.utg000036l.10 | REGULATOR OF CHROMOSOME CONDENSATION |
| PMEG.utg000036l.12 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000036l.13 | CWF19, CELL CYCLE CONTROL PROTEIN |
| PMEG.utg000036l.14 | PEROXISOMAL SARCOSINE OXIDASE |
| PMEG.utg000036l.15 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
