About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000036l.16LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
PMEG.utg000036l.17
PMEG.utg000036l.18HILLARIN
PMEG.utg000036l.19TRANS-GOLGI PROTEIN GMX33
PMEG.utg000036l.2TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
PMEG.utg000036l.20CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161
PMEG.utg000036l.21HEME-BINDING PROTEIN-RELATED
PMEG.utg000036l.3SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1
PMEG.utg000036l.4
PMEG.utg000036l.5MEVALONATE KINASE/GALACTOKINASE
PMEG.utg000036l.6ALPHA KINASE/ELONGATION FACTOR 2 KINASE
PMEG.utg000036l.7NUDIX HYDROLASE, NUDC SUBFAMILY
PMEG.utg000036l.8
PMEG.utg000036l.9BTK-BINDING PROTEIN-RELATED
PMEG.utg000037l.1
PMEG.utg000037l.11MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
PMEG.utg000037l.12STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
PMEG.utg000037l.13
PMEG.utg000037l.14MIDNOLIN
PMEG.utg000037l.15POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
PMEG.utg000037l.16DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX
PMEG.utg000037l.17PROTEIN CBG16200
PMEG.utg000037l.18MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23
PMEG.utg000037l.19MYOSIN REGULATORY LIGHT CHAIN 2
PMEG.utg000037l.2GLYCOSYL TRANSFERASE-RELATED
PMEG.utg000037l.20RNA 3' TERMINAL PHOSPHATE CYCLASE
PMEG.utg000037l.21COILED-COIL DOMAIN-CONTAINING PROTEIN 78
PMEG.utg000037l.22DNA REPAIR ENDONUCLEASE XPF
PMEG.utg000037l.23DNA REPAIR ENDONUCLEASE XPF
PMEG.utg000037l.24UNCHARACTERIZED
PMEG.utg000037l.25PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
PMEG.utg000037l.26PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
PMEG.utg000037l.27SNF2/RAD54 FAMILY MEMBER
PMEG.utg000037l.28SNF2/RAD54 FAMILY MEMBER
PMEG.utg000037l.29HISTONE H3 METHYLTRANSFERASE
PMEG.utg000037l.3KPL2-RELATED
PMEG.utg000037l.30DIPHTHINE SYNTHASE
PMEG.utg000037l.31UBIQUITIN-PROTEIN LIGASE E3C
PMEG.utg000037l.32ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
PMEG.utg000037l.4NARDILYSIN
PMEG.utg000037l.5NARDILYSIN
PMEG.utg000037l.6SPHINGOMYELIN PHOSPHODIESTERASE
PMEG.utg000037l.7RNA 3' TERMINAL PHOSPHATE CYCLASE
PMEG.utg000037l.8PROTEASOME SUBUNIT ALPHA/BETA
PMEG.utg000037l.9MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER
PMEG.utg000038l.1TRANSMEMBRANE PROTEIN 256
PMEG.utg000038l.10
PMEG.utg000038l.11
PMEG.utg000038l.12XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
PMEG.utg000038l.13UNCHARACTERIZED
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