About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s045.g0104.t1SI:CH211-67E16.11
Lsat_s045.g0105.t1
Lsat_s045.g0106.t1SI:CH211-67E16.11
Lsat_s045.g0107.t1ZINC FINGER RNA-BINDING PROTEIN
Lsat_s045.g0108.t1SERINE/THREONINE-PROTEIN KINASE NEK
Lsat_s045.g0109.t1GUANYLYL CYCLASE
Lsat_s045.g0110.t1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
Lsat_s045.g0111.t1ORMDL PROTEINS
Lsat_s045.g0112.t1ORMDL PROTEINS
Lsat_s045.g0113.t1
Lsat_s045.g0114.t1INTEGRIN ALPHA
Lsat_s045.g0115.t1MY011 PROTEIN
Lsat_s045.g0116.t1UPF0565 PROTEIN C2ORF69
Lsat_s045.g0117.t1-
Lsat_s045.g0118.t1
Lsat_s045.g0119.t1
Lsat_s045.g0120.t1PROTEIN CBG17025
Lsat_s045.g0121.t12-5 OLIGOADENYLATE SYNTHETASE
Lsat_s045.g0122.t1ZINC FINGER PROTEIN
Lsat_s045.g0123.t1MUCIN 4-RELATED
Lsat_s045.g0124.t1MUCIN 4-RELATED
Lsat_s045.g0125.t1
Lsat_s045.g0126.t1GUANYLYL CYCLASE
Lsat_s045.g0127.t1GUANYLYL CYCLASE
Lsat_s045.g0128.t1
Lsat_s045.g0129.t1GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
Lsat_s045.g0130.t1UNCHARACTERIZED
Lsat_s045.g0131.t1RNA BINDING PROTEIN
Lsat_s045.g0132.t1ZINC FINGER PROTEIN
Lsat_s045.g0133.t1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Lsat_s045.g0134.t1DEPHOSPHO-COA KINASE-RELATED
Lsat_s045.g0135.t1
Lsat_s045.g0136.t1ADP RIBOSYLATION FACTOR-RELATED
Lsat_s045.g0137.t1
Lsat_s045.g0138.t1ADP RIBOSYLATION FACTOR-RELATED
Lsat_s045.g0139.t1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221
Lsat_s045.g0140.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s045.g0141.t1
Lsat_s045.g0142.t1DUF853 DOMAIN-CONTAINING PROTEIN
Lsat_s045.g0143.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s045.g0144.t1MUSCLEBLIND-LIKE PROTEIN
Lsat_s045.g0145.t1BETA TRANSDUCIN-RELATED PROTEIN
Lsat_s045.g0146.t1
Lsat_s045.g0147.t1INTEGRIN BETA SUBUNIT
Lsat_s045.g0148.t1
Lsat_s045.g0149.t1
Lsat_s045.g0150.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s045.g0151.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s045.g0152.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s045.g0153.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 173
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