Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s045.g0104.t1 | SI:CH211-67E16.11 |
Lsat_s045.g0105.t1 | |
Lsat_s045.g0106.t1 | SI:CH211-67E16.11 |
Lsat_s045.g0107.t1 | ZINC FINGER RNA-BINDING PROTEIN |
Lsat_s045.g0108.t1 | SERINE/THREONINE-PROTEIN KINASE NEK |
Lsat_s045.g0109.t1 | GUANYLYL CYCLASE |
Lsat_s045.g0110.t1 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
Lsat_s045.g0111.t1 | ORMDL PROTEINS |
Lsat_s045.g0112.t1 | ORMDL PROTEINS |
Lsat_s045.g0113.t1 | |
Lsat_s045.g0114.t1 | INTEGRIN ALPHA |
Lsat_s045.g0115.t1 | MY011 PROTEIN |
Lsat_s045.g0116.t1 | UPF0565 PROTEIN C2ORF69 |
Lsat_s045.g0117.t1 | - |
Lsat_s045.g0118.t1 | |
Lsat_s045.g0119.t1 | |
Lsat_s045.g0120.t1 | PROTEIN CBG17025 |
Lsat_s045.g0121.t1 | 2-5 OLIGOADENYLATE SYNTHETASE |
Lsat_s045.g0122.t1 | ZINC FINGER PROTEIN |
Lsat_s045.g0123.t1 | MUCIN 4-RELATED |
Lsat_s045.g0124.t1 | MUCIN 4-RELATED |
Lsat_s045.g0125.t1 | |
Lsat_s045.g0126.t1 | GUANYLYL CYCLASE |
Lsat_s045.g0127.t1 | GUANYLYL CYCLASE |
Lsat_s045.g0128.t1 | |
Lsat_s045.g0129.t1 | GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE |
Lsat_s045.g0130.t1 | UNCHARACTERIZED |
Lsat_s045.g0131.t1 | RNA BINDING PROTEIN |
Lsat_s045.g0132.t1 | ZINC FINGER PROTEIN |
Lsat_s045.g0133.t1 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Lsat_s045.g0134.t1 | DEPHOSPHO-COA KINASE-RELATED |
Lsat_s045.g0135.t1 | |
Lsat_s045.g0136.t1 | ADP RIBOSYLATION FACTOR-RELATED |
Lsat_s045.g0137.t1 | |
Lsat_s045.g0138.t1 | ADP RIBOSYLATION FACTOR-RELATED |
Lsat_s045.g0139.t1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221 |
Lsat_s045.g0140.t1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Lsat_s045.g0141.t1 | |
Lsat_s045.g0142.t1 | DUF853 DOMAIN-CONTAINING PROTEIN |
Lsat_s045.g0143.t1 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
Lsat_s045.g0144.t1 | MUSCLEBLIND-LIKE PROTEIN |
Lsat_s045.g0145.t1 | BETA TRANSDUCIN-RELATED PROTEIN |
Lsat_s045.g0146.t1 | |
Lsat_s045.g0147.t1 | INTEGRIN BETA SUBUNIT |
Lsat_s045.g0148.t1 | |
Lsat_s045.g0149.t1 | |
Lsat_s045.g0150.t1 | SOLUTE CARRIER FAMILY 22 MEMBER |
Lsat_s045.g0151.t1 | ATILLA, ISOFORM B-RELATED-RELATED |
Lsat_s045.g0152.t1 | SOLUTE CARRIER FAMILY 22 MEMBER |
Lsat_s045.g0153.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 173 |