About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s046.g0076.t1
Lsat_s046.g0077.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0078.t1
Lsat_s046.g0079.t1
Lsat_s046.g0080.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0081.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0082.t1
Lsat_s046.g0083.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0084.t1
Lsat_s046.g0085.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0086.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0087.t1
Lsat_s046.g0088.t1
Lsat_s046.g0089.t1RETINOL DEHYDROGENASE
Lsat_s046.g0090.t1TRANSCRIPTION FACTOR MAF
Lsat_s046.g0091.t1CCCH ZINGC FINGER
Lsat_s046.g0092.t1
Lsat_s046.g0093.t1
Lsat_s046.g0094.t1
Lsat_s046.g0095.t1
Lsat_s046.g0096.t1EUKARYOTIC TRANSLATION INITIATION FACTOR
Lsat_s046.g0097.t1TONSOKU-LIKE PROTEIN
Lsat_s046.g0098.t1TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN
Lsat_s046.g0099.t1HYPOTHETICAL PROTEIN LOC100359752
Lsat_s046.g0100.t1PROTEASOME SUBUNIT ALPHA/BETA
Lsat_s046.g0101.t1NUCLEAR TRANSPORT FACTOR 2
Lsat_s046.g0102.t1CENTROMERE PROTEIN T
Lsat_s046.g0103.t1UNCHARACTERIZED
Lsat_s046.g0104.t1NULP1-RELATED
Lsat_s046.g0105.t1ATP-DEPENDENT PROTEASE
Lsat_s046.g0106.t1
Lsat_s046.g0107.t1SORTING NEXIN 20, 21
Lsat_s046.g0108.t1UNCHARACTERIZED
Lsat_s046.g0109.t1NUCLEOLAR PROTEIN 9
Lsat_s046.g0110.t1PRESEQUENCE PROTEASE
Lsat_s046.g0111.t1
Lsat_s046.g0112.t1
Lsat_s046.g0113.t1
Lsat_s046.g0114.t1
Lsat_s046.g0115.t1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Lsat_s046.g0116.t1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Lsat_s046.g0117.t1
Lsat_s046.g0118.t1
Lsat_s046.g0119.t1PROTEIN PHOSPHATASE 2C
Lsat_s046.g0120.t139S RIBOSOMAL PROTEIN L36, MITOCHONDRIAL
Lsat_s046.g0121.t1CALBINDIN
Lsat_s046.g0122.t1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Lsat_s046.g0123.t1
Lsat_s046.g0124.t1
Lsat_s046.g0125.t1RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
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