About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s045.g0154.t1PER1-RELATED
Lsat_s045.g0155.t1LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED
Lsat_s045.g0156.t1
Lsat_s045.g0157.t1
Lsat_s045.g0158.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s045.g0159.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s045.g0160.t1
Lsat_s045.g0161.t1
Lsat_s045.g0162.t1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
Lsat_s045.g0163.t1
Lsat_s045.g0164.t1G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Lsat_s045.g0165.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s045.g0166.t1P140CAP/SNIP-RELATED
Lsat_s045.g0167.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s045.g0168.t1ANNEXIN
Lsat_s045.g0169.t1ENDORIBONUCLEASE YBEY, CHLOROPLASTIC
Lsat_s045.g0170.t1
Lsat_s045.g0171.t1MUCIN 4-RELATED
Lsat_s045.g0172.t1
Lsat_s045.g0173.t1MUCIN 4-RELATED
Lsat_s045.g0174.t1
Lsat_s045.g0175.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s045.g0176.t1
Lsat_s045.g0177.t1TRANSPOSON
Lsat_s045.g0178.t1
Lsat_s046.g0001.t1DNA-DIRECTED RNA POLYMERASE
Lsat_s046.g0002.t1
Lsat_s046.g0003.t1ARYLSULFATASE FAMILY MEMBER
Lsat_s046.g0004.t1UNCHARACTERIZED
Lsat_s046.g0005.t1NUCLEAR HORMONE RECEPTOR
Lsat_s046.g0006.t1
Lsat_s046.g0007.t1
Lsat_s046.g0008.t1
Lsat_s046.g0009.t1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Lsat_s046.g0010.t1ER MEMBRANE PROTEIN COMPLEX
Lsat_s046.g0011.t1KINESIN-LIKE PROTEIN KIN-12D
Lsat_s046.g0012.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s046.g0013.t1HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBER
Lsat_s046.g0014.t1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Lsat_s046.g0015.t1
Lsat_s046.g0016.t1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Lsat_s046.g0017.t1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Lsat_s046.g0018.t1
Lsat_s046.g0019.t1OVOCHYMASE-RELATED
Lsat_s046.g0020.t1AMPLIFIED IN BREAST CANCER 2-RELATED
Lsat_s046.g0021.t1
Lsat_s046.g0022.t1N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN
Lsat_s046.g0023.t1DNA REPAIR PROTEIN REV1
Lsat_s046.g0024.t1UNCHARACTERIZED
Lsat_s046.g0025.t1DYNAMIN
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