About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s046.g0026.t1PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR PEX5
Lsat_s046.g0027.t1RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT
Lsat_s046.g0028.t1RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED
Lsat_s046.g0029.t1PROHIBITIN
Lsat_s046.g0030.t1INNER MEMBRANE TRANSPORTER YGJI-RELATED
Lsat_s046.g0031.t1
Lsat_s046.g0032.t1INNEXIN
Lsat_s046.g0033.t1INNEXIN
Lsat_s046.g0034.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s046.g0035.t1
Lsat_s046.g0036.t1
Lsat_s046.g0037.t1
Lsat_s046.g0038.t1
Lsat_s046.g0039.t1
Lsat_s046.g0040.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s046.g0041.t1
Lsat_s046.g0042.t1LORICRIN
Lsat_s046.g0043.t1INNER MEMBRANE TRANSPORTER YGJI-RELATED
Lsat_s046.g0044.t1
Lsat_s046.g0045.t1
Lsat_s046.g0046.t1ACYL-COA SYNTHETASE
Lsat_s046.g0047.t1
Lsat_s046.g0048.t1WU:FJ29H11
Lsat_s046.g0049.t1SET AND MYND DOMAIN-CONTAINING PROTEIN 4
Lsat_s046.g0050.t1PUTATIVE (AFU_ORTHOLOGUE AFUA_4G14580)-RELATED
Lsat_s046.g0051.t1
Lsat_s046.g0052.t1
Lsat_s046.g0053.t1
Lsat_s046.g0054.t1
Lsat_s046.g0055.t1
Lsat_s046.g0056.t1
Lsat_s046.g0057.t1ETS
Lsat_s046.g0058.t1ETS
Lsat_s046.g0059.t1
Lsat_s046.g0060.t1
Lsat_s046.g0061.t1SI:DKEY-192D15.2-RELATED
Lsat_s046.g0062.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0063.t1
Lsat_s046.g0064.t1
Lsat_s046.g0065.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0066.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0067.t1
Lsat_s046.g0068.t1
Lsat_s046.g0069.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0070.t1-
Lsat_s046.g0071.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0072.t1
Lsat_s046.g0073.t1
Lsat_s046.g0074.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Lsat_s046.g0075.t1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
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