About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s049.g0032.t1
Lsat_s049.g0033.t1
Lsat_s049.g0034.t1
Lsat_s049.g0035.t1
Lsat_s049.g0036.t1
Lsat_s049.g0037.t1BASIGIN RELATED
Lsat_s049.g0038.t1CONTACTIN 5
Lsat_s049.g0039.t1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Lsat_s049.g0040.t1MRNA-CAPPING ENZYME
Lsat_s049.g0041.t1ACYL-COA THIOESTERASE
Lsat_s049.g0042.t1
Lsat_s049.g0043.t1SYNAPTIC ADHESION-LIKE MOLECULE SALM
Lsat_s049.g0044.t1
Lsat_s049.g0045.t1
Lsat_s049.g0046.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s049.g0047.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s049.g0048.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s049.g0049.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s049.g0050.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s049.g0051.t1CRUMBS FAMILY MEMBER
Lsat_s049.g0052.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s049.g0053.t1-
Lsat_s049.g0054.t1CRUMBS FAMILY MEMBER
Lsat_s049.g0055.t1-
Lsat_s049.g0056.t1
Lsat_s049.g0057.t1
Lsat_s049.g0058.t1
Lsat_s049.g0059.t1
Lsat_s049.g0060.t1
Lsat_s049.g0061.t1
Lsat_s049.g0062.t1BONE MARROW PROTEOGLYCAN
Lsat_s049.g0063.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s049.g0064.t1EXPRESSED PROTEIN
Lsat_s049.g0065.t1ATP-DEPENDENT RNA HELICASE
Lsat_s049.g0066.t1LITHOSTATHINE
Lsat_s049.g0067.t1
Lsat_s049.g0068.t1
Lsat_s049.g0069.t1MYOSIN
Lsat_s049.g0070.t1
Lsat_s049.g0071.t1
Lsat_s049.g0072.t1YIPPEE DOMAIN-CONTAINING PROTEIN
Lsat_s049.g0073.t1SLIT HOMOLOG
Lsat_s049.g0074.t1CRUMBS FAMILY MEMBER
Lsat_s049.g0075.t1CRUMBS FAMILY MEMBER
Lsat_s049.g0076.t1
Lsat_s049.g0077.t1NG5
Lsat_s049.g0078.t1
Lsat_s049.g0079.t1ANGIOTENSIN-CONVERTING ENZYME
Lsat_s049.g0080.t1
Lsat_s049.g0081.t1LOC100145250 PROTEIN
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