About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s049.g0132.t1TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Lsat_s049.g0133.t1
Lsat_s049.g0134.t1
Lsat_s049.g0135.t1
Lsat_s049.g0136.t1GEO13361P1-RELATED
Lsat_s049.g0137.t1
Lsat_s049.g0138.t1
Lsat_s049.g0139.t1
Lsat_s049.g0140.t1
Lsat_s049.g0141.t1
Lsat_s049.g0142.t1ADENYLYL CYCLASE-ASSOCIATED PROTEIN
Lsat_s049.g0143.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s049.g0144.t1LD39211P
Lsat_s049.g0145.t1
Lsat_s049.g0146.t1
Lsat_s049.g0147.t1LD39211P
Lsat_s049.g0148.t1LD39211P
Lsat_s049.g0149.t1PUTATIVE-RELATED
Lsat_s049.g0150.t1LD39211P
Lsat_s049.g0151.t1
Lsat_s049.g0152.t1LD39211P
Lsat_s049.g0153.t1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Lsat_s049.g0154.t1N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Lsat_s049.g0155.t1SIMILAR TO HYPOTHETICAL PROTEIN
Lsat_s049.g0156.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s049.g0157.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Lsat_s049.g0158.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s049.g0159.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s049.g0160.t1PERIAXIN-LIKE
Lsat_s049.g0161.t1PERIAXIN-LIKE
Lsat_s049.g0162.t1
Lsat_s049.g0163.t1
Lsat_s049.g0164.t1
Lsat_s049.g0165.t1
Lsat_s049.g0166.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s049.g0167.t1
Lsat_s049.g0168.t1
Lsat_s049.g0169.t1
Lsat_s049.g0170.t1TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Lsat_s049.g0171.t1
Lsat_s049.g0172.t1ETS
Lsat_s049.g0173.t1
Lsat_s049.g0174.t1
Lsat_s049.g0175.t1MUCIN 4-RELATED
Lsat_s049.g0176.t1DENTIN SIALOPHOSPHOPROTEIN
Lsat_s049.g0177.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s049.g0178.t1SOLUTE CARRIER FAMILY 17
Lsat_s049.g0179.t1
Lsat_s049.g0180.t1
Lsat_s049.g0181.t1
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