Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s048.g0076.t1 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Lsat_s048.g0077.t1 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Lsat_s048.g0078.t1 | |
Lsat_s048.g0079.t1 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Lsat_s048.g0080.t1 | SER/THR PROTEIN KINASE-TRB |
Lsat_s048.g0081.t1 | |
Lsat_s048.g0082.t1 | UNCHARACTERIZED |
Lsat_s048.g0083.t1 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Lsat_s048.g0084.t1 | |
Lsat_s048.g0085.t1 | |
Lsat_s048.g0086.t1 | |
Lsat_s048.g0087.t1 | |
Lsat_s048.g0088.t1 | |
Lsat_s048.g0089.t1 | |
Lsat_s048.g0090.t1 | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN |
Lsat_s048.g0091.t1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Lsat_s048.g0092.t1 | |
Lsat_s048.g0093.t1 | |
Lsat_s048.g0094.t1 | |
Lsat_s048.g0095.t1 | |
Lsat_s048.g0096.t1 | |
Lsat_s048.g0097.t1 | INNEXIN |
Lsat_s048.g0098.t1 | ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s048.g0099.t1 | ENDORIBONUCLEASE LACTB2 |
Lsat_s048.g0100.t1 | OCTANOYLTRANSFERASE |
Lsat_s048.g0101.t1 | LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD |
Lsat_s048.g0102.t1 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Lsat_s048.g0103.t1 | LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD |
Lsat_s048.g0104.t1 | |
Lsat_s048.g0105.t1 | FI19922P1-RELATED |
Lsat_s048.g0106.t1 | ANKYRIN REPEAT FAMILY A |
Lsat_s048.g0107.t1 | BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH |
Lsat_s048.g0108.t1 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
Lsat_s048.g0109.t1 | FAS APOPTOTIC INHIBITORY MOLECULE FAIM |
Lsat_s048.g0110.t1 | CENTROSOMAL PROTEIN OF 70 KDA |
Lsat_s048.g0111.t1 | TRANSCRIPTION FACTOR CP2 |
Lsat_s048.g0112.t1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 9 |
Lsat_s048.g0113.t1 | NON-SPECIFIC LETHAL 1, ISOFORM M |
Lsat_s048.g0114.t1 | FAST LEU-RICH DOMAIN-CONTAINING |
Lsat_s048.g0115.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s048.g0116.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s048.g0117.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s048.g0118.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s048.g0119.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s048.g0120.t1 | POLY A POLYMERASE CID PAP -RELATED |
Lsat_s048.g0121.t1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Lsat_s048.g0122.t1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Lsat_s048.g0123.t1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Lsat_s048.g0124.t1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Lsat_s048.g0125.t1 | SH3 DOMAIN-BINDING PROTEIN 5 |