About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s050.g0031.t1LORICRIN
Lsat_s050.g0032.t1LORICRIN
Lsat_s050.g0033.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s050.g0034.t1
Lsat_s050.g0035.t1
Lsat_s050.g0036.t1
Lsat_s050.g0037.t1
Lsat_s050.g0038.t1NUCLEOPLASMIN
Lsat_s050.g0039.t1SODIUM-BILE ACID COTRANSPORTER
Lsat_s050.g0040.t1
Lsat_s050.g0041.t1PROTEIN FOLDING REGULATOR
Lsat_s050.g0042.t1TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2
Lsat_s050.g0043.t1
Lsat_s050.g0044.t1
Lsat_s050.g0045.t1SIGNAL RECOGNITION PARTICLE 72
Lsat_s050.g0046.t1INWARD RECTIFIER POTASSIUM CHANNEL
Lsat_s050.g0047.t1INWARD RECTIFIER POTASSIUM CHANNEL
Lsat_s050.g0048.t1SIDEROFLEXIN
Lsat_s050.g0049.t1TRANSMEMBRANE PROTEIN 128
Lsat_s050.g0050.t1GALACTOSE-3-O-SULFOTRANSFERASE
Lsat_s050.g0051.t1
Lsat_s050.g0052.t1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Lsat_s050.g0053.t1
Lsat_s050.g0054.t1
Lsat_s050.g0055.t1PEPTIDASE
Lsat_s050.g0056.t1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Lsat_s050.g0057.t1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Lsat_s050.g0058.t112 KDA HEAT SHOCK PROTEIN
Lsat_s050.g0059.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s050.g0060.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s050.g0061.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s050.g0062.t1
Lsat_s050.g0063.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s050.g0064.t1EXPORTIN 4,7-RELATED
Lsat_s050.g0065.t1EXPORTIN 4,7-RELATED
Lsat_s050.g0066.t1AMINO ACID TRANSPORTER
Lsat_s050.g0067.t1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Lsat_s050.g0068.t1CAT EYE SYNDROME CRITICAL REGION PROTEIN 6
Lsat_s050.g0069.t1MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
Lsat_s050.g0070.t1UNCHARACTERIZED
Lsat_s050.g0071.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s050.g0072.t1FATTY ACID SYNTHASE
Lsat_s050.g0073.t13-5 EXONUCLEASE
Lsat_s050.g0074.t13-5 EXONUCLEASE
Lsat_s050.g0075.t128S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Lsat_s050.g0076.t1UNCHARACTERIZED
Lsat_s050.g0077.t1UNCHARACTERIZED
Lsat_s050.g0078.t1
Lsat_s050.g0079.t1
Lsat_s050.g0080.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
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