About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s050.g0081.t1
Lsat_s050.g0082.t1TRANSCRIPTION FACTOR COE FAMILY MEMBER
Lsat_s050.g0083.t1
Lsat_s050.g0084.t1
Lsat_s050.g0085.t1
Lsat_s050.g0086.t1TRANSCRIPTION FACTOR COE FAMILY MEMBER
Lsat_s050.g0087.t1
Lsat_s050.g0088.t1
Lsat_s050.g0089.t1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Lsat_s050.g0090.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s050.g0091.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s050.g0092.t1
Lsat_s050.g0093.t1-
Lsat_s050.g0094.t1
Lsat_s050.g0095.t1HUNTINGTON DISEASE PROTEIN
Lsat_s050.g0096.t1UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1
Lsat_s050.g0097.t1DUF614 FAMILY PROTEIN-RELATED
Lsat_s050.g0098.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s050.g0099.t1C10ORF188 FAMILY MEMBER
Lsat_s050.g0100.t1DYNEIN INTERMEDIATE CHAIN
Lsat_s050.g0101.t1DYNEIN INTERMEDIATE CHAIN
Lsat_s050.g0102.t1UNCHARACTERIZED
Lsat_s050.g0103.t1
Lsat_s050.g0104.t1
Lsat_s050.g0105.t1
Lsat_s050.g0106.t1
Lsat_s050.g0107.t1NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
Lsat_s050.g0108.t1RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
Lsat_s050.g0109.t1GLYCOPROTEIN 38
Lsat_s050.g0110.t14-NITROPHENYLPHOSPHATASE-RELATED
Lsat_s050.g0111.t1MASK PROTEIN
Lsat_s050.g0112.t1
Lsat_s050.g0113.t1
Lsat_s050.g0114.t1-
Lsat_s050.g0115.t1
Lsat_s050.g0116.t1
Lsat_s050.g0117.t1
Lsat_s050.g0118.t1
Lsat_s050.g0119.t1
Lsat_s050.g0120.t1
Lsat_s050.g0121.t1
Lsat_s050.g0122.t1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Lsat_s050.g0123.t1PHOSPHOGLYCERATE MUTASE
Lsat_s050.g0124.t1SYNAPTOBREVIN HOMOLOG YKT6
Lsat_s050.g0125.t1ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBER
Lsat_s050.g0126.t1MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
Lsat_s050.g0127.t1
Lsat_s050.g0128.t1
Lsat_s050.g0129.t1
Lsat_s050.g0130.t1ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBER
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