The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000048l.94 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
PMEG.utg000048l.95 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
PMEG.utg000048l.96 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
PMEG.utg000048l.97 | OS05G0521000 PROTEIN |
PMEG.utg000048l.98 | BILIVERDIN REDUCTASE A |
PMEG.utg000048l.99 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
PMEG.utg000049l.1 | XANTHINE DEHYDROGENASE |
PMEG.utg000049l.10 | INACTIVE HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 1 |
PMEG.utg000049l.100 | KU AUTOANTIGEN DNA HELICASE |
PMEG.utg000049l.101 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
PMEG.utg000049l.102 | YEAST SPT2-RELATED |
PMEG.utg000049l.103 | POLY [ADP-RIBOSE] POLYMERASE |
PMEG.utg000049l.104 | HOMEOBOX PROTEIN ARISTALESS |
PMEG.utg000049l.105 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
PMEG.utg000049l.106 | |
PMEG.utg000049l.107 | |
PMEG.utg000049l.108 | F-BOX ONLY PROTEIN 47 |
PMEG.utg000049l.109 | PAX6 NEIGHBOR PROTEIN PAXNEB |
PMEG.utg000049l.11 | RH59310P |
PMEG.utg000049l.110 | PROTEIN-TYROSINE-PHOSPHATASE |
PMEG.utg000049l.111 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
PMEG.utg000049l.112 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
PMEG.utg000049l.113 | |
PMEG.utg000049l.114 | F20B24.22 |
PMEG.utg000049l.115 | HCG1796489 |
PMEG.utg000049l.116 | |
PMEG.utg000049l.117 | TRANSMEMBRANE PROTEIN 101 |
PMEG.utg000049l.118 | DNA REPAIR PROTEIN XRCC4 |
PMEG.utg000049l.119 | |
PMEG.utg000049l.12 | PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL |
PMEG.utg000049l.120 | VOLTAGE-GATED POTASSIUM CHANNEL |
PMEG.utg000049l.121 | GAMMA GLUTAMYL TRANSPEPTIDASE |
PMEG.utg000049l.122 | |
PMEG.utg000049l.123 | GAMMA GLUTAMYL TRANSPEPTIDASE |
PMEG.utg000049l.124 | |
PMEG.utg000049l.125 | PUR-TRANSCRIPTIONAL ACTIVATOR |
PMEG.utg000049l.126 | SI:CH211-245H14.1-RELATED |
PMEG.utg000049l.127 | CYSTEINE PROTEASE FAMILY C1-RELATED |
PMEG.utg000049l.128 | CENTROMERE PROTEIN E |
PMEG.utg000049l.129 | FERRITIN |
PMEG.utg000049l.13 | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED |
PMEG.utg000049l.130 | POLYCYSTIN FAMILY MEMBER |
PMEG.utg000049l.131 | SCAVENGER RECEPTOR CLASS F |
PMEG.utg000049l.132 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
PMEG.utg000049l.133 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD |
PMEG.utg000049l.134 | HYDROLASE |
PMEG.utg000049l.135 | ACYL-COA SYNTHETASE |
PMEG.utg000049l.136 | ZGC:172139 |
PMEG.utg000049l.137 | NUCLEOTIDYLTRANSFERASE |
PMEG.utg000049l.138 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |