About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000049l.139DNA-DIRECTED RNA POLYMERASE II
PMEG.utg000049l.14-
PMEG.utg000049l.140OROTATE PHOSPHORIBOSYLTRANSFERASE
PMEG.utg000049l.141UNCHARACTERIZED
PMEG.utg000049l.142PROTEIN CBG21859
PMEG.utg000049l.15
PMEG.utg000049l.16GABA-B RECEPTOR
PMEG.utg000049l.17SORTING NEXIN
PMEG.utg000049l.18TETRASPANIN
PMEG.utg000049l.19F20B24.22
PMEG.utg000049l.2SORTING NEXIN
PMEG.utg000049l.20LD15586P
PMEG.utg000049l.21
PMEG.utg000049l.22MYOTROPHIN
PMEG.utg000049l.23TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP
PMEG.utg000049l.24KINESIN-LIKE PROTEIN KLP-3
PMEG.utg000049l.25CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
PMEG.utg000049l.26LUNG ADENOMA SUSCEPTIBILITY 1-RELATED
PMEG.utg000049l.27SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
PMEG.utg000049l.28NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1
PMEG.utg000049l.29TRANSMEMBRANE PROTEIN 117
PMEG.utg000049l.3BCL9
PMEG.utg000049l.30SODIUM/DICARBOXYLATE SYMPORTER-RELATED
PMEG.utg000049l.31XANTHINE DEHYDROGENASE
PMEG.utg000049l.32CYTOSOLIC CARBOXYPEPTIDASE
PMEG.utg000049l.33TBC1 DOMAIN FAMILY MEMBER 7
PMEG.utg000049l.34RFWD3 PROTEIN
PMEG.utg000049l.35SHORT-CHAIN DEHYDROGENASE/REDUCTASE
PMEG.utg000049l.36NURIM
PMEG.utg000049l.37NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
PMEG.utg000049l.38SH2-SH3 ADAPTOR PROTEIN-RELATED
PMEG.utg000049l.39FORKHEAD BOX PROTEIN
PMEG.utg000049l.4DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
PMEG.utg000049l.40ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
PMEG.utg000049l.41BATTENIN
PMEG.utg000049l.42
PMEG.utg000049l.43ETS
PMEG.utg000049l.44ETS
PMEG.utg000049l.45ETS
PMEG.utg000049l.46ANTIGEN BSP, PUTATIVE-RELATED
PMEG.utg000049l.47PATCHED-RELATED
PMEG.utg000049l.48AKT1 SUBSTRATE 1 PROTEIN
PMEG.utg000049l.49PROTEIN CBG21859
PMEG.utg000049l.5CYTOCHROME P450 FAMILY 3
PMEG.utg000049l.50OXYSTEROL-BINDING PROTEIN-RELATED
PMEG.utg000049l.51U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C
PMEG.utg000049l.52NUCLEAR PORE COMPLEX PROTEIN NUP160
PMEG.utg000049l.53TRANSCRIPTION FACTOR-LIKE 5 PROTEIN
PMEG.utg000049l.54
PMEG.utg000049l.55AGAP004733-PA
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