About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s069.g0021.t1BONUS, ISOFORM C-RELATED
Lsat_s069.g0022.t1
Lsat_s069.g0023.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s069.g0024.t1CULLIN
Lsat_s069.g0025.t139S RIBOSOMAL PROTEIN L12
Lsat_s069.g0026.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s069.g0027.t1
Lsat_s069.g0028.t1METHIONYL-TRNA SYNTHETASE
Lsat_s069.g0029.t1ZINC FINGER B-BOX DOMAIN-CONTAINING PROTEIN 1
Lsat_s069.g0030.t1
Lsat_s069.g0031.t1
Lsat_s069.g0032.t1DRONGO, ISOFORM F
Lsat_s069.g0033.t1
Lsat_s069.g0034.t1TF-1 CELL APOPTOSIS RELATED PROTEIN-15
Lsat_s069.g0035.t1
Lsat_s069.g0036.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s069.g0037.t1-
Lsat_s069.g0038.t1MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
Lsat_s069.g0039.t1LEISHMANOLYSIN-LIKE PEPTIDASE
Lsat_s069.g0040.t1
Lsat_s069.g0041.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s069.g0042.t1SYNOVIAL SARCOMA, X MEMBER
Lsat_s069.g0043.t1AGAP007109-PA
Lsat_s069.g0044.t1GLYCOGENIN SUBFAMILY MEMBER
Lsat_s069.g0045.t1
Lsat_s069.g0046.t1
Lsat_s069.g0047.t1SODIUM/HYDROGEN EXCHANGER
Lsat_s069.g0048.t1LIM DOMAIN-CONTAINING PROTEIN
Lsat_s069.g0049.t1
Lsat_s069.g0050.t1
Lsat_s069.g0051.t1OROTATE PHOSPHORIBOSYLTRANSFERASE
Lsat_s069.g0052.t1ARRESTIN
Lsat_s069.g0053.t1
Lsat_s069.g0054.t1
Lsat_s069.g0055.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s069.g0056.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s069.g0057.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s069.g0058.t1
Lsat_s069.g0059.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s069.g0060.t1TROPONIN
Lsat_s069.g0061.t1
Lsat_s069.g0062.t1
Lsat_s069.g0063.t1
Lsat_s069.g0064.t1FUKUTIN RELATED PROTEIN
Lsat_s069.g0065.t1
Lsat_s069.g0066.t1
Lsat_s069.g0067.t1
Lsat_s069.g0068.t1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31
Lsat_s069.g0069.t1FUKUTIN RELATED PROTEIN
Lsat_s069.g0070.t1
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