About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s067.g0045.t1TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR
Lsat_s067.g0046.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s067.g0047.t1ARL14 EFFECTOR PROTEIN
Lsat_s067.g0048.t1IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB
Lsat_s067.g0049.t1
Lsat_s067.g0050.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s067.g0051.t1
Lsat_s067.g0052.t1D-ERYTHRULOSE REDUCTASE
Lsat_s067.g0053.t1D-ERYTHRULOSE REDUCTASE
Lsat_s067.g0054.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s067.g0055.t1GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT
Lsat_s067.g0056.t1
Lsat_s067.g0057.t1TUMOR NECROSIS FACTOR INDUCED PROTEIN
Lsat_s067.g0058.t13-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
Lsat_s067.g0059.t1AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
Lsat_s067.g0060.t1UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER
Lsat_s067.g0061.t1UBIQUILIN
Lsat_s067.g0062.t1DNA POLYMERASE SUBUNIT GAMMA-1
Lsat_s067.g0063.t1
Lsat_s067.g0064.t1ALKALINE CERAMIDASE
Lsat_s067.g0065.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Lsat_s067.g0066.t1DYNACTIN SUBUNIT 3
Lsat_s067.g0067.t1CENTROSOMAL PROTEIN 2
Lsat_s067.g0068.t1
Lsat_s067.g0069.t1
Lsat_s067.g0070.t1
Lsat_s067.g0071.t1
Lsat_s067.g0072.t1
Lsat_s067.g0073.t1
Lsat_s067.g0074.t1PROLINE-RICH PROTEIN PRCC
Lsat_s067.g0075.t1
Lsat_s067.g0076.t1TRANSDUCIN-LIKE ENHANCER PROTEIN
Lsat_s067.g0077.t1
Lsat_s067.g0078.t1
Lsat_s067.g0079.t1
Lsat_s067.g0080.t1SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
Lsat_s067.g0081.t1NICE-3
Lsat_s067.g0082.t1
Lsat_s067.g0083.t1
Lsat_s067.g0084.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s067.g0085.t1
Lsat_s067.g0086.t1
Lsat_s067.g0087.t1
Lsat_s067.g0088.t1COLLAGEN ALPHA
Lsat_s067.g0089.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s067.g0090.t1AGAP011099-PA
Lsat_s067.g0091.t1GLUTAMATE DEHYDROGENASE
Lsat_s067.g0092.t1GLUTAMATE DEHYDROGENASE
Lsat_s067.g0093.t1PROTEIN CBG26694
Lsat_s067.g0094.t1GLR0591 PROTEIN
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