About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s066.g0083.t1
Lsat_s066.g0084.t1
Lsat_s066.g0085.t1
Lsat_s066.g0086.t1
Lsat_s066.g0087.t1
Lsat_s066.g0088.t1
Lsat_s067.g0001.t1
Lsat_s067.g0002.t1KH DOMAIN CONTAINING RNA BINDING PROTEIN
Lsat_s067.g0003.t1UNCHARACTERIZED
Lsat_s067.g0004.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s067.g0005.t1
Lsat_s067.g0006.t1
Lsat_s067.g0007.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s067.g0008.t1REPETIN
Lsat_s067.g0009.t1
Lsat_s067.g0010.t1
Lsat_s067.g0011.t1ZINC FINGER PROTEIN
Lsat_s067.g0012.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s067.g0013.t1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Lsat_s067.g0014.t1ZINC FINGER PROTEIN
Lsat_s067.g0015.t1ZINC FINGER PROTEIN
Lsat_s067.g0016.t1ZINC FINGER PROTEIN
Lsat_s067.g0017.t1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Lsat_s067.g0018.t1ZINC FINGER AND BTB DOMAIN-CONTAINING
Lsat_s067.g0019.t1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Lsat_s067.g0020.t1ZINC FINGER AND BTB DOMAIN-CONTAINING
Lsat_s067.g0021.t1ZINC FINGER PROTEIN
Lsat_s067.g0022.t1ZINC FINGER PROTEIN
Lsat_s067.g0023.t1
Lsat_s067.g0024.t1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Lsat_s067.g0025.t1
Lsat_s067.g0026.t1CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
Lsat_s067.g0027.t1THREONINE-TRNA LIGASE
Lsat_s067.g0028.t1
Lsat_s067.g0029.t1PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE
Lsat_s067.g0030.t1COLLAGEN ALPHA
Lsat_s067.g0031.t1MITOCHONDRIAL DISTRIBUTION REGULATOR MISATO
Lsat_s067.g0032.t1
Lsat_s067.g0033.t1LAMIN DM0-RELATED
Lsat_s067.g0034.t1
Lsat_s067.g0035.t1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Lsat_s067.g0036.t1GROUNDHOG-RELATED
Lsat_s067.g0037.t1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Lsat_s067.g0038.t1SEMAPHORIN
Lsat_s067.g0039.t1R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG
Lsat_s067.g0040.t1SEMAPHORIN
Lsat_s067.g0041.t1
Lsat_s067.g0042.t1
Lsat_s067.g0043.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s067.g0044.t1ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE
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