The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000054l.7 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
PMEG.utg000054l.8 | CENTROMERE PROTEIN N |
PMEG.utg000054l.9 | LEISHMANOLYSIN-LIKE PEPTIDASE |
PMEG.utg000055l.1 | UNCHARACTERIZED |
PMEG.utg000055l.10 | TESTIS DEVELOPMENT PROTEIN PRTD |
PMEG.utg000055l.100 | OXIDASE/PEROXIDASE |
PMEG.utg000055l.101 | BETA-1,4-GALACTOSYLTRANSFERASE |
PMEG.utg000055l.102 | RIBONUCLEASE P SUBUNIT P30 |
PMEG.utg000055l.103 | |
PMEG.utg000055l.104 | PROTEIN CBG18546 |
PMEG.utg000055l.105 | NHL REPEAT-CONTAINING PROTEIN 2 |
PMEG.utg000055l.106 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
PMEG.utg000055l.107 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000055l.108 | |
PMEG.utg000055l.109 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
PMEG.utg000055l.11 | |
PMEG.utg000055l.110 | ACTIN |
PMEG.utg000055l.111 | SUPPRESSOR OF FUSED |
PMEG.utg000055l.112 | BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 LIKE 1 |
PMEG.utg000055l.113 | BETA TRANSDUCIN-RELATED PROTEIN |
PMEG.utg000055l.114 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
PMEG.utg000055l.115 | RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOG |
PMEG.utg000055l.116 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
PMEG.utg000055l.117 | LEUCINE AMINOPEPTIDASE-RELATED |
PMEG.utg000055l.118 | NARDILYSIN |
PMEG.utg000055l.119 | GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 |
PMEG.utg000055l.12 | HEAT SHOCK PROTEIN 70KDA |
PMEG.utg000055l.120 | DELTEX-RELATED |
PMEG.utg000055l.121 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
PMEG.utg000055l.122 | |
PMEG.utg000055l.123 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
PMEG.utg000055l.124 | MONOCARBOXYLATE TRANSPORTER |
PMEG.utg000055l.125 | MYOTROPHIN |
PMEG.utg000055l.126 | SMALL NUCLEAR RIBONUCLEOPROTEIN |
PMEG.utg000055l.127 | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED |
PMEG.utg000055l.128 | O-GLCNACASE |
PMEG.utg000055l.129 | PALMITOYLTRANSFERASE ZDHHC16 |
PMEG.utg000055l.13 | FUCOSE MUTAROTASE |
PMEG.utg000055l.130 | KINESIN-LIKE PROTEIN KIF11 |
PMEG.utg000055l.131 | MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
PMEG.utg000055l.132 | WD-40 REPEAT PROTEIN |
PMEG.utg000055l.133 | SYNTAXIN-18 |
PMEG.utg000055l.134 | SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2 |
PMEG.utg000055l.135 | |
PMEG.utg000055l.136 | TETRASPANIN |
PMEG.utg000055l.137 | |
PMEG.utg000055l.138 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
PMEG.utg000055l.139 | BASIGIN RELATED |
PMEG.utg000055l.14 | XAA-PRO AMINOPEPTIDASE 1 |
PMEG.utg000055l.140 | 39S RIBOSOMAL PROTEIN L43 |