The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000055l.53 | CYTOCHROME P450 26 |
| PMEG.utg000055l.54 | F-BOX ONLY PROTEIN 33 |
| PMEG.utg000055l.55 | ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 |
| PMEG.utg000055l.56 | DYNEIN INTERMEDIATE CHAIN |
| PMEG.utg000055l.57 | SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASE |
| PMEG.utg000055l.58 | UNCHARACTERIZED |
| PMEG.utg000055l.59 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| PMEG.utg000055l.6 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
| PMEG.utg000055l.60 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| PMEG.utg000055l.61 | BROMODOMAIN-CONTAINING PROTEIN 8 |
| PMEG.utg000055l.62 | V-TYPE PROTON ATPASE SUBUNIT B |
| PMEG.utg000055l.63 | UPF0722 PROTEIN C11ORF88 |
| PMEG.utg000055l.64 | POLY(U)-BINDING-SPLICING FACTOR PUF60-B-RELATED |
| PMEG.utg000055l.65 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
| PMEG.utg000055l.66 | DDRGK DOMAIN-CONTAINING PROTEIN 1 |
| PMEG.utg000055l.67 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
| PMEG.utg000055l.68 | UNCHARACTERIZED |
| PMEG.utg000055l.69 | AP-5 COMPLEX SUBUNIT SIGMA-1 |
| PMEG.utg000055l.7 | HIGH MOBILITY GROUP PROTEIN 2 |
| PMEG.utg000055l.70 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| PMEG.utg000055l.71 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000055l.72 | |
| PMEG.utg000055l.73 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| PMEG.utg000055l.74 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
| PMEG.utg000055l.75 | HILLARIN |
| PMEG.utg000055l.76 | UV-STIMULATED SCAFFOLD PROTEIN A |
| PMEG.utg000055l.77 | ENOLASE |
| PMEG.utg000055l.78 | |
| PMEG.utg000055l.79 | URACIL-DNA GLYCOSYLASE |
| PMEG.utg000055l.8 | PROTEIN PBDC1 |
| PMEG.utg000055l.80 | SOX TRANSCRIPTION FACTOR |
| PMEG.utg000055l.81 | |
| PMEG.utg000055l.82 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
| PMEG.utg000055l.83 | AMINOTRANSFERASE CLASS III |
| PMEG.utg000055l.84 | TETRASPANIN |
| PMEG.utg000055l.85 | FIBROBLAST GROWTH FACTOR RECEPTOR |
| PMEG.utg000055l.86 | TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B |
| PMEG.utg000055l.87 | L-SERYL-TRNA(SEC) KINASE |
| PMEG.utg000055l.88 | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 |
| PMEG.utg000055l.89 | BRIDGING INTEGRATOR 3 |
| PMEG.utg000055l.9 | COILED-COIL DOMAIN-CONTAINING PROTEIN 125 |
| PMEG.utg000055l.90 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 |
| PMEG.utg000055l.91 | AGAP001623-PA |
| PMEG.utg000055l.92 | 3-5 EXONUCLEASE |
| PMEG.utg000055l.93 | DIHYDROPTERIDINE REDUCTASE |
| PMEG.utg000055l.94 | |
| PMEG.utg000055l.95 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |
| PMEG.utg000055l.96 | RAI16 PROTEIN-RELATED |
| PMEG.utg000055l.97 | |
| PMEG.utg000055l.98 | ZINC FINGER PROTEIN |
