The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000053l.75 | |
| PMEG.utg000053l.76 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| PMEG.utg000053l.77 | MADF DOMAIN TRANSCRIPTION FACTOR |
| PMEG.utg000053l.78 | PROTEIN DD3-3 |
| PMEG.utg000053l.79 | SERINE PEPTIDASE S9 FAMILY MEMBER |
| PMEG.utg000053l.8 | LD30288P |
| PMEG.utg000053l.80 | SOLUTE CARRIER FAMILY 35 MEMBER B |
| PMEG.utg000053l.81 | CELL DIVISION PROTEIN KINASE |
| PMEG.utg000053l.82 | UDP/ADP-SUGAR PYROPHOSPHATASE |
| PMEG.utg000053l.83 | ATR-INTERACTING PROTEIN |
| PMEG.utg000053l.84 | NADH-UBIQUINONE OXIDOREDUCTASE ESSS SUBUNIT, MITOCHONDRIAL PRECURSOR |
| PMEG.utg000053l.85 | ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 |
| PMEG.utg000053l.86 | CADHERIN-23 |
| PMEG.utg000053l.87 | METALLOPROTEASE INHIBITOR |
| PMEG.utg000053l.9 | |
| PMEG.utg000054l.1 | CUBILIN |
| PMEG.utg000054l.10 | ZINC FINGER PROTEIN 142 |
| PMEG.utg000054l.11 | AMINO ACID TRANSPORTER |
| PMEG.utg000054l.12 | NEUROCHONDRIN |
| PMEG.utg000054l.13 | EXOSOME COMPLEX COMPONENT |
| PMEG.utg000054l.14 | UNCHARACTERIZED |
| PMEG.utg000054l.15 | AGAP000281-PA |
| PMEG.utg000054l.16 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000054l.17 | ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 |
| PMEG.utg000054l.18 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 |
| PMEG.utg000054l.19 | UNCHARACTERIZED |
| PMEG.utg000054l.2 | UNCHARACTERIZED |
| PMEG.utg000054l.20 | - |
| PMEG.utg000054l.21 | N4BP1-RELATED |
| PMEG.utg000054l.22 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| PMEG.utg000054l.23 | CENTROMERE PROTEIN L |
| PMEG.utg000054l.24 | RNA POLYMERASE II CTD PHOSPHATASE |
| PMEG.utg000054l.25 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| PMEG.utg000054l.26 | UNCHARACTERIZED |
| PMEG.utg000054l.27 | PX SERINE/THREONINE KINASE PXK |
| PMEG.utg000054l.28 | CRUMBS FAMILY MEMBER |
| PMEG.utg000054l.29 | SSM4 PROTEIN |
| PMEG.utg000054l.3 | SCD6 PROTEIN-RELATED |
| PMEG.utg000054l.30 | - |
| PMEG.utg000054l.31 | ADENYLATE CYCLASE TYPE 1 |
| PMEG.utg000054l.32 | GDAP1, ISOFORM A |
| PMEG.utg000054l.33 | SI:CH211-108C17.2-RELATED-RELATED |
| PMEG.utg000054l.34 | AGAP005574-PA |
| PMEG.utg000054l.35 | - |
| PMEG.utg000054l.36 | TRANSMEMBRANE PROTEIN 208 |
| PMEG.utg000054l.37 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
| PMEG.utg000054l.38 | FRIEND OF GATA2-RELATED |
| PMEG.utg000054l.4 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 |
| PMEG.utg000054l.5 | NEGATIVE ELONGATION FACTOR D |
| PMEG.utg000054l.6 | FG-GAP REPEAT-CONTAINING PROTEIN |
