About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Deep sea, Vent field2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504796%37,037

References
TitleJournalPubmed ID
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

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Gene IDDescription
RPACG02158.2
RPACG02158.3
RPACG02158.4
RPACG02159.1UNCHARACTERIZED
RPACG02160.1PROTEIN CBG11839-RELATED
RPACG02161.1RYBP AND YAF2-RELATED
RPACG02162.1
RPACG02163.1
RPACG02164.1SH3 DOMAIN-BINDING PROTEIN 5
RPACG02165.1DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
RPACG02166.1TRANSMEMBRANE PROTEIN 106B
RPACG02167.1LANC-LIKE PROTEIN
RPACG02168.1CYTOCHROME P450 FAMILY 7
RPACG02169.1TERPENE CYCLASE/MUTASE FAMILY MEMBER
RPACG02170.1
RPACG02171.1
RPACG02172.1BCL-2 RELATED
RPACG02173.1ACETYLTRANSFERASE
RPACG02174.1
RPACG02175.1UNCHARACTERIZED
RPACG02176.1S-ANTIGEN PROTEIN
RPACG02177.1S-ANTIGEN PROTEIN
RPACG02178.1TRANSMEMBRANE PROTEIN
RPACG02178.2
RPACG02179.1
RPACG02180.1-
RPACG02181.1
RPACG02182.1
RPACG02183.1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
RPACG02183.2
RPACG02183.3
RPACG02184.1
RPACG02185.1
RPACG02186.1STG PROTEIN
RPACG02187.1
RPACG02188.1STG PROTEIN
RPACG02189.1
RPACG02190.1
RPACG02191.1STG PROTEIN
RPACG02192.1
RPACG02193.1
RPACG02193.2
RPACG02193.3
RPACG02193.4
RPACG02194.1DUF614 FAMILY PROTEIN-RELATED
RPACG02195.1
RPACG02195.2
RPACG02196.1TELOMERE-ASSOCIATED PROTEIN RIF1
RPACG02197.1PROTEIN CBG17025
RPACG02198.1
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