About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11144-
Paelopatides11145TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides11146-
Paelopatides11147-
Paelopatides11148EPM2A-INTERACTING PROTEIN 1
Paelopatides11149FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11150-
Paelopatides11151-
Paelopatides11152TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT
Paelopatides11153-
Paelopatides11154VASCULAR CELL ADHESION MOLECULE 1
Paelopatides11155REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11156-
Paelopatides11157-
Paelopatides11158THAP DOMAIN PROTEIN
Paelopatides11159ATP-DEPENDENT DNA HELICASE
Paelopatides11160MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Paelopatides11161REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11162FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11163ACTIN
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