About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11060FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11062RETROTRANSPOSON
Paelopatides11063-
Paelopatides11064-
Paelopatides11065FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11066SI:CH211-196P9.1-RELATED
Paelopatides11067-
Paelopatides11068PROTEIN, PUTATIVE-RELATED
Paelopatides11069FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides11070LEUCINE-RICH REPEAT, ISOFORM F-RELATED
Paelopatides11071-
Paelopatides11072-
Paelopatides11073BONUS, ISOFORM C-RELATED
Paelopatides11074-
Paelopatides11075-
Paelopatides11076BONUS, ISOFORM C-RELATED
Paelopatides11077PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides11078PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides11079RETROTRANSPOSON
Paelopatides11080RETROTRANSPOSON
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