About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides11101REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides11102PROTEIN CBG26694
Paelopatides11103PROTEIN CBG26694
Paelopatides11104-
Paelopatides11105-
Paelopatides11106OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides11107GATOR COMPLEX PROTEIN WDR24
Paelopatides11108ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides11109GATOR COMPLEX PROTEIN WDR24
Paelopatides11110CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides11111LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides11112POL PROTEIN
Paelopatides11113CHONDROITIN SYNTHASE
Paelopatides11114BETA1,3-GALACTOSYLTRANSFERASE
Paelopatides11115NETRIN RECEPTOR UNC5
Paelopatides11116ENZYMATIC POLYPROTEIN-RELATED
Paelopatides11117-
Paelopatides11118TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides11119HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides11120SPLICING FACTOR SF3A-RELATED
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