Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s112.g0026.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s112.g0027.t1 | |
Lsat_s112.g0028.t1 | BLR2807 PROTEIN |
Lsat_s112.g0029.t1 | ATILLA, ISOFORM B-RELATED-RELATED |
Lsat_s112.g0030.t1 | ALDEHYDE DEHYDROGENASE-RELATED |
Lsat_s112.g0031.t1 | ALDEHYDE DEHYDROGENASE-RELATED |
Lsat_s112.g0032.t1 | ALDEHYDE DEHYDROGENASE-RELATED |
Lsat_s112.g0033.t1 | ALDEHYDE DEHYDROGENASE-RELATED |
Lsat_s112.g0034.t1 | |
Lsat_s112.g0035.t1 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
Lsat_s112.g0036.t1 | ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE |
Lsat_s112.g0037.t1 | |
Lsat_s112.g0038.t1 | |
Lsat_s112.g0039.t1 | |
Lsat_s112.g0040.t1 | |
Lsat_s112.g0041.t1 | RIIA DOMAIN-CONTAINING PROTEIN 1 |
Lsat_s112.g0042.t1 | |
Lsat_s112.g0043.t1 | ADENOSINE KINASE |
Lsat_s112.g0044.t1 | ARGININE/SERINE RICH SPLICING FACTOR SF4/14 |
Lsat_s112.g0045.t1 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 |
Lsat_s112.g0046.t1 | |
Lsat_s112.g0047.t1 | MOLTING PROTEIN MLT-4 |
Lsat_s112.g0048.t1 | |
Lsat_s112.g0049.t1 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
Lsat_s112.g0050.t1 | HEAVYWEIGHT, ISOFORM A |
Lsat_s112.g0051.t1 | 60S RIBOSOMAL PROTEIN L24 |
Lsat_s112.g0052.t1 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Lsat_s113.g0001.t1 | |
Lsat_s113.g0002.t1 | |
Lsat_s113.g0003.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Lsat_s113.g0004.t1 | |
Lsat_s113.g0005.t1 | |
Lsat_s113.g0006.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Lsat_s113.g0007.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Lsat_s113.g0008.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Lsat_s113.g0009.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Lsat_s113.g0010.t1 | KELCH PROTEIN |
Lsat_s113.g0011.t1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Lsat_s113.g0012.t1 | |
Lsat_s113.g0013.t1 | |
Lsat_s113.g0014.t1 | |
Lsat_s113.g0015.t1 | |
Lsat_s113.g0016.t1 | |
Lsat_s113.g0017.t1 | |
Lsat_s113.g0018.t1 | |
Lsat_s113.g0019.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
Lsat_s113.g0020.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
Lsat_s113.g0021.t1 | |
Lsat_s113.g0022.t1 | |
Lsat_s113.g0023.t1 | ANNEXIN |