About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s110.g0012.t1ZINC FINGER TRANSCRIPTION FACTOR TRPS1
Lsat_s110.g0013.t1
Lsat_s110.g0014.t1SET DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s110.g0015.t1
Lsat_s110.g0016.t1BASIGIN RELATED
Lsat_s110.g0017.t1TESTIS-EXPRESSED PROTEIN 36
Lsat_s110.g0018.t1SARCOMA ANTIGEN NY-SAR-23
Lsat_s110.g0019.t1PSEUDOURIDYLATE SYNTHASE
Lsat_s110.g0020.t1PROTEIN DPCD
Lsat_s110.g0021.t1TELOMERIC REPEAT-BINDING FACTOR 1 TERF1
Lsat_s110.g0022.t1
Lsat_s110.g0023.t1
Lsat_s110.g0024.t1
Lsat_s110.g0025.t1
Lsat_s110.g0026.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s110.g0027.t1
Lsat_s110.g0028.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s110.g0029.t1
Lsat_s110.g0030.t1
Lsat_s110.g0031.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s110.g0032.t1
Lsat_s110.g0033.t1BONUS, ISOFORM C-RELATED
Lsat_s110.g0034.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s110.g0035.t1
Lsat_s110.g0036.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s110.g0037.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s110.g0038.t1OLIGORIBONUCLEASE, MITOCHONDRIAL
Lsat_s110.g0039.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s110.g0040.t1
Lsat_s110.g0041.t1
Lsat_s111.g0001.t1SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC
Lsat_s111.g0002.t1
Lsat_s111.g0003.t1RAC GTPASE-ACTIVATING PROTEIN 1
Lsat_s111.g0004.t1HISTONE DEACETYLASE HDAC1-RELATED
Lsat_s111.g0005.t1
Lsat_s111.g0006.t1
Lsat_s111.g0007.t1TUBULIN
Lsat_s111.g0008.t1TUBULIN
Lsat_s111.g0009.t1TUBULIN
Lsat_s111.g0010.t1TUBULIN
Lsat_s111.g0011.t1
Lsat_s111.g0012.t1
Lsat_s111.g0013.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s111.g0014.t1DOMON DOMAIN-CONTAINING PROTEIN FRRS1L
Lsat_s111.g0015.t1
Lsat_s111.g0016.t1
Lsat_s111.g0017.t1
Lsat_s111.g0018.t1AGAP008648-PA
Lsat_s111.g0019.t1AGAP008810-PA
Lsat_s111.g0020.t1MONOCARBOXYLATE TRANSPORTER
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