About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s118.g0004.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s118.g0005.t1
Lsat_s118.g0006.t1
Lsat_s118.g0007.t1TRANSMEMBRANE PROTEIN KIAA1109
Lsat_s118.g0008.t1TRANSMEMBRANE PROTEIN KIAA1109
Lsat_s118.g0009.t1
Lsat_s118.g0010.t1STEROL ISOMERASE
Lsat_s118.g0011.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s118.g0012.t1
Lsat_s118.g0013.t1
Lsat_s118.g0014.t1
Lsat_s118.g0015.t1CADHERIN DOMAIN-CONTAINING PROTEIN
Lsat_s118.g0016.t1
Lsat_s118.g0017.t1
Lsat_s118.g0018.t1
Lsat_s118.g0019.t1
Lsat_s118.g0020.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s118.g0021.t1MULTIFUNCTIONAL PROTEIN ADE2
Lsat_s118.g0022.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Lsat_s118.g0023.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s118.g0024.t1
Lsat_s118.g0025.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s118.g0026.t1
Lsat_s118.g0027.t1SLR5058 PROTEIN
Lsat_s118.g0028.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s118.g0029.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s118.g0030.t1MUCIN 4-RELATED
Lsat_s118.g0031.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s118.g0032.t1MUCIN 4-RELATED
Lsat_s118.g0033.t1ALPHA- 1,3 -FUCOSYLTRANSFERASE
Lsat_s118.g0034.t1
Lsat_s118.g0035.t1
Lsat_s118.g0036.t1SI:CH73-193C12.2-RELATED
Lsat_s118.g0037.t1ALPHA- 1,3 -FUCOSYLTRANSFERASE
Lsat_s118.g0038.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s118.g0039.t1
Lsat_s118.g0040.t1ALPHA- 1,3 -FUCOSYLTRANSFERASE
Lsat_s118.g0041.t1OSJNBA0004B13.7 PROTEIN
Lsat_s118.g0042.t1ALPHA- 1,3 -FUCOSYLTRANSFERASE
Lsat_s118.g0043.t1SI:CH211-243P7.3-RELATED
Lsat_s119.g0001.t1
Lsat_s119.g0002.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s119.g0003.t1ALCOHOL DEHYDROGENASE
Lsat_s119.g0004.t1
Lsat_s119.g0005.t1
Lsat_s119.g0006.t1
Lsat_s119.g0007.t1
Lsat_s119.g0008.t1
Lsat_s119.g0009.t1
Lsat_s119.g0010.t1
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