About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s119.g0011.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s119.g0012.t1METHIONINE SULFOXIDE REDUCTASE
Lsat_s119.g0013.t1
Lsat_s119.g0014.t1
Lsat_s119.g0015.t1
Lsat_s119.g0016.t1
Lsat_s119.g0017.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s119.g0018.t1
Lsat_s119.g0019.t1
Lsat_s119.g0020.t1NUCLEOLAR GTP-BINDING PROTEIN 1
Lsat_s119.g0021.t1
Lsat_s119.g0022.t1SPONDIN
Lsat_s119.g0023.t1SI:CH211-161H7.5-RELATED
Lsat_s119.g0024.t1
Lsat_s119.g0025.t1
Lsat_s119.g0026.t1
Lsat_s119.g0027.t1VOLTAGE-GATED POTASSIUM CHANNEL
Lsat_s119.g0028.t1
Lsat_s119.g0029.t1
Lsat_s119.g0030.t1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3
Lsat_s119.g0031.t1OS-9-RELATED
Lsat_s119.g0032.t1HILLARIN
Lsat_s119.g0033.t1
Lsat_s119.g0034.t1FIBRILLIN-RELATED
Lsat_s119.g0035.t1IRE1-RELATED
Lsat_s119.g0036.t1
Lsat_s119.g0037.t1SET DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s119.g0038.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s120.g0001.t1
Lsat_s120.g0002.t1
Lsat_s120.g0003.t1
Lsat_s120.g0004.t1
Lsat_s120.g0005.t1
Lsat_s120.g0006.t1
Lsat_s120.g0007.t1
Lsat_s120.g0008.t1
Lsat_s120.g0009.t1
Lsat_s120.g0010.t1
Lsat_s120.g0011.t1
Lsat_s120.g0012.t1
Lsat_s120.g0013.t1-
Lsat_s120.g0014.t1
Lsat_s120.g0015.t1
Lsat_s120.g0016.t1
Lsat_s120.g0017.t1
Lsat_s120.g0018.t1
Lsat_s120.g0019.t1
Lsat_s121.g0001.t1
Lsat_s121.g0002.t1
Lsat_s121.g0003.t1
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