About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s121.g0004.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s121.g0005.t1
Lsat_s121.g0006.t1
Lsat_s121.g0007.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s121.g0008.t1
Lsat_s121.g0009.t1PROTEIN CBG03580
Lsat_s121.g0010.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s121.g0011.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s121.g0012.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s121.g0013.t1
Lsat_s121.g0014.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s121.g0015.t1MUCIN-22
Lsat_s121.g0016.t1COLLAGEN ALPHA
Lsat_s121.g0017.t1TRANSFERASE, PUTATIVE-RELATED
Lsat_s121.g0018.t1
Lsat_s121.g0019.t1COLLAGEN ALPHA
Lsat_s121.g0020.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s121.g0021.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s121.g0022.t1
Lsat_s121.g0023.t1
Lsat_s122.g0001.t1
Lsat_s122.g0002.t1
Lsat_s122.g0003.t1
Lsat_s122.g0004.t1
Lsat_s122.g0005.t1PHD-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s122.g0006.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s122.g0007.t1
Lsat_s122.g0008.t1EPPIN
Lsat_s122.g0009.t1PROTEIN CBG26694
Lsat_s122.g0010.t1
Lsat_s122.g0011.t1
Lsat_s122.g0012.t1
Lsat_s122.g0013.t1
Lsat_s122.g0014.t1
Lsat_s122.g0015.t1
Lsat_s122.g0016.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s122.g0017.t1
Lsat_s122.g0018.t1RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Lsat_s122.g0019.t1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Lsat_s122.g0020.t1
Lsat_s122.g0021.t1
Lsat_s122.g0022.t1EPPIN
Lsat_s122.g0023.t1
Lsat_s122.g0024.t1
Lsat_s123.g0001.t1
Lsat_s123.g0002.t1
Lsat_s123.g0003.t1PROTEIN CBG12054-RELATED
Lsat_s123.g0004.t1HOMEOBOX PROTEIN
Lsat_s123.g0005.t1PROTEIN CBG12054-RELATED
Lsat_s123.g0006.t1
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