About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s124.g0021.t1
Lsat_s124.g0022.t1
Lsat_s124.g0023.t1
Lsat_s124.g0024.t1
Lsat_s124.g0025.t1
Lsat_s124.g0026.t1
Lsat_s124.g0027.t1GLYCOSYLTRANSFERASE-LIKE 1
Lsat_s124.g0028.t1
Lsat_s125.g0001.t1
Lsat_s125.g0002.t1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Lsat_s125.g0003.t1ATAXIN 2-RELATED
Lsat_s125.g0004.t1
Lsat_s125.g0005.t1
Lsat_s125.g0006.t1
Lsat_s125.g0007.t1
Lsat_s125.g0008.t1
Lsat_s125.g0009.t1UNC80
Lsat_s125.g0010.t1MALATE AND LACTATE DEHYDROGENASE
Lsat_s125.g0011.t1
Lsat_s125.g0012.t1PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Lsat_s125.g0013.t1SPHINGOMYELIN PHOSPHODIESTERASE 4
Lsat_s125.g0014.t1ZINC FINGER PROTEIN
Lsat_s125.g0015.t1
Lsat_s125.g0016.t1
Lsat_s125.g0017.t1TETRATRICOPEPTIDE REPEAT PROTEIN 14
Lsat_s125.g0018.t1PRE-MRNA-PROCESSING FACTOR 19
Lsat_s125.g0019.t1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Lsat_s125.g0020.t1-
Lsat_s125.g0021.t1
Lsat_s125.g0022.t1DEP DOMAIN CONTAINING PROTEIN 5
Lsat_s125.g0023.t1
Lsat_s125.g0024.t1DEP DOMAIN CONTAINING PROTEIN 5
Lsat_s125.g0025.t150S/60S RIBOSOMAL PROTEIN L16
Lsat_s125.g0026.t1-
Lsat_s125.g0027.t1
Lsat_s125.g0028.t1
Lsat_s125.g0029.t1
Lsat_s125.g0030.t1
Lsat_s125.g0031.t1
Lsat_s126.g0001.t1RGD1565685 PROTEIN
Lsat_s126.g0002.t1SODIUM/POTASSIUM/CALCIUM EXCHANGER
Lsat_s126.g0003.t1
Lsat_s126.g0004.t1
Lsat_s126.g0005.t1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Lsat_s126.g0006.t1
Lsat_s126.g0007.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s126.g0008.t1RGD1565685 PROTEIN
Lsat_s126.g0009.t1SODIUM/POTASSIUM/CALCIUM EXCHANGER
Lsat_s126.g0010.t1
Lsat_s126.g0011.t1
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