About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_15373-0.1
Bpl_scaf_15394-0.1
Bpl_scaf_15404-0.0
Bpl_scaf_15410-0.11ACROSIN-RELATED
Bpl_scaf_15410-0.2SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_15410-0.9OVOCHYMASE-RELATED
Bpl_scaf_15437-0.4
Bpl_scaf_15437-0.6GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_15448-0.8
Bpl_scaf_15457-0.6PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
Bpl_scaf_15457-0.7SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_15464-0.8CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_15464-0.9CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_15468-0.2CADHERIN-87A
Bpl_scaf_15478-0.14
Bpl_scaf_15478-0.9DIACYLGLYCEROL KINASE
Bpl_scaf_15478-2.460S ACIDIC RIBOSOMAL PROTEIN P0
Bpl_scaf_15478-2.5BETA LACTAMASE DOMAIN
Bpl_scaf_15478-2.6PHOSPHATIDYLINOSITOL KINASE
Bpl_scaf_15478-3.3
Bpl_scaf_15478-4.5MYOSIN LIGHT CHAIN 1, 3
Bpl_scaf_15478-4.6ZINC FINGER PROTEIN
Bpl_scaf_15478-4.8
Bpl_scaf_15478-5.12
Bpl_scaf_15478-5.13VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
Bpl_scaf_15478-5.16GLUTAMATE DECARBOXYLASE-RELATED
Bpl_scaf_15478-5.25GLUTAMATE DECARBOXYLASE-RELATED
Bpl_scaf_15478-5.27RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_15478-5.28ACIREDUCTONE DIOXYGENASE
Bpl_scaf_15478-5.8
Bpl_scaf_15480-0.2TRANSPOSON
Bpl_scaf_15480-0.3
Bpl_scaf_15491-0.0
Bpl_scaf_15491-0.2
Bpl_scaf_15491-0.5
Bpl_scaf_15501-0.11
Bpl_scaf_15501-0.12
Bpl_scaf_15501-0.3
Bpl_scaf_15501-0.4
Bpl_scaf_15501-0.5
Bpl_scaf_15507-0.23CADHERIN-23
Bpl_scaf_15515-0.7TEMPTIN
Bpl_scaf_15515-0.8
Bpl_scaf_15516-0.5NUCLEAR HORMONE RECEPTOR
Bpl_scaf_15516-2.0
Bpl_scaf_15516-2.4
Bpl_scaf_15516-3.11
Bpl_scaf_15516-3.8TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
Bpl_scaf_15516-3.9-
Bpl_scaf_15516-4.4DENN DOMAIN-CONTAINING PROTEIN 4
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