About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_15684-0.13
Bpl_scaf_15684-0.47RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_15684-0.48
Bpl_scaf_15684-0.50
Bpl_scaf_15695-0.4G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_15695-0.8ORGANIC ANION TRANSPORTER
Bpl_scaf_15708-0.10LD33804P
Bpl_scaf_15708-0.16LD33804P
Bpl_scaf_15708-0.17TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Bpl_scaf_15715-0.0
Bpl_scaf_15715-0.10FTP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_15715-0.6FTP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_15725-0.14
Bpl_scaf_15725-0.2
Bpl_scaf_15725-0.20RE45066P-RELATED
Bpl_scaf_15735-0.0
Bpl_scaf_15735-0.10CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_15735-0.15
Bpl_scaf_15735-1.10UNCHARACTERIZED
Bpl_scaf_15735-1.23ENOYL-COA HYDRATASE-RELATED
Bpl_scaf_15735-1.24E3 UBIQUITIN-PROTEIN LIGASE HECTD3
Bpl_scaf_15735-1.25
Bpl_scaf_15735-1.26TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
Bpl_scaf_15749-0.0
Bpl_scaf_15749-0.11UNNAMED PRODUCT
Bpl_scaf_15749-0.14UNNAMED PRODUCT
Bpl_scaf_15749-0.15
Bpl_scaf_15749-0.16UNNAMED PRODUCT
Bpl_scaf_15749-0.53UNNAMED PRODUCT
Bpl_scaf_15749-0.54UNNAMED PRODUCT
Bpl_scaf_15749-0.55UNNAMED PRODUCT
Bpl_scaf_15749-0.56UNNAMED PRODUCT
Bpl_scaf_15749-1.0
Bpl_scaf_15749-1.12
Bpl_scaf_15749-1.13
Bpl_scaf_15749-1.17UNNAMED PRODUCT
Bpl_scaf_15749-1.18UNNAMED PRODUCT
Bpl_scaf_15749-1.19
Bpl_scaf_15749-1.20UNNAMED PRODUCT
Bpl_scaf_15749-1.21UNNAMED PRODUCT
Bpl_scaf_15749-1.26UNNAMED PRODUCT
Bpl_scaf_15749-1.78TNF RECEPTOR ASSOCIATED FACTOR
Bpl_scaf_15749-1.79UNNAMED PRODUCT
Bpl_scaf_15749-1.80UNNAMED PRODUCT
Bpl_scaf_15749-1.81UNNAMED PRODUCT
Bpl_scaf_1576-0.3FTP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_15763-0.5
Bpl_scaf_15763-0.7BETA-GALACTOSIDASE RELATED
Bpl_scaf_15763-1.0
Bpl_scaf_15763-1.12METALLOPEPTIDASE M28 FAMILY MEMBER
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