About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_16143-7.16
Bpl_scaf_16143-7.17WSCD FAMILY MEMBER CG9164
Bpl_scaf_16143-8.10PDZ DOMAIN-CONTAINING PROTEIN 8
Bpl_scaf_16143-8.13PDZ DOMAIN-CONTAINING PROTEIN 8
Bpl_scaf_16143-9.1BETA-1,4-MANNOSYLTRANSFERASE EGH
Bpl_scaf_16143-9.6IONOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_16144-0.10BONUS, ISOFORM C-RELATED
Bpl_scaf_16144-0.3BONUS, ISOFORM C-RELATED
Bpl_scaf_16144-0.6
Bpl_scaf_16144-0.9
Bpl_scaf_16153-0.1
Bpl_scaf_16153-0.2
Bpl_scaf_16171-0.10CEREBELLIN-RELATED
Bpl_scaf_16171-0.4
Bpl_scaf_16171-0.5CEREBELLIN-RELATED
Bpl_scaf_16171-0.6CEREBELLIN-RELATED
Bpl_scaf_16179-0.7
Bpl_scaf_16197-0.6
Bpl_scaf_16197-0.7
Bpl_scaf_16216-0.0
Bpl_scaf_16216-0.1
Bpl_scaf_16217-1.4REVERSE TRANSCRIPTASE
Bpl_scaf_16217-1.6REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_16217-2.3REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_16217-3.4
Bpl_scaf_16217-3.5REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_16217-4.6REGULATOR OF G PROTEIN SIGNALING
Bpl_scaf_1622-0.0
Bpl_scaf_1622-0.3
Bpl_scaf_16239-0.0
Bpl_scaf_16239-0.3TOLL-LIKE RECEPTOR
Bpl_scaf_16239-0.5
Bpl_scaf_16239-0.9
Bpl_scaf_16239-1.0TOLL-LIKE RECEPTOR
Bpl_scaf_16239-1.1TOLL-LIKE RECEPTOR
Bpl_scaf_16239-1.2TOLL-LIKE RECEPTOR
Bpl_scaf_16239-2.10HOMEOBOX PROTEIN NKX
Bpl_scaf_16239-3.15CALPAIN
Bpl_scaf_16239-4.2FOS TRANSCRIPTION FACTOR-RELATED
Bpl_scaf_16239-5.10OPSIN
Bpl_scaf_16239-5.17PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Bpl_scaf_16239-5.2ZINC FINGER PROTEIN
Bpl_scaf_16239-5.23FOS TRANSCRIPTION FACTOR-RELATED
Bpl_scaf_16239-5.5LD30288P
Bpl_scaf_16239-5.50
Bpl_scaf_16239-5.51FOS TRANSCRIPTION FACTOR-RELATED
Bpl_scaf_16239-5.52
Bpl_scaf_16239-5.53
Bpl_scaf_16240-0.10
Bpl_scaf_16240-0.11
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