About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_8330-2.25
Bpl_scaf_8330-2.35MYOSIN HEAVY CHAIN - RELATED
Bpl_scaf_8330-2.36
Bpl_scaf_8332-0.0
Bpl_scaf_8332-1.5
Bpl_scaf_8332-1.8REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
Bpl_scaf_8332-2.17TESTIS-EXPRESSED PROTEIN 264
Bpl_scaf_8332-2.18MYOTUBULARIN-RELATED
Bpl_scaf_8332-2.31SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
Bpl_scaf_8332-2.32TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE
Bpl_scaf_8332-2.33
Bpl_scaf_8339-0.2
Bpl_scaf_8339-0.4DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_8340-0.1PUTATIVE-RELATED
Bpl_scaf_8341-0.2TOLL-LIKE RECEPTOR 7-RELATED
Bpl_scaf_8342-1.11
Bpl_scaf_8342-1.2
Bpl_scaf_8342-1.5NUCLEOPORIN NUP37 P37 -RELATED
Bpl_scaf_8342-1.8
Bpl_scaf_8342-2.13OS10G0105400 PROTEIN
Bpl_scaf_8342-2.14OS10G0105400 PROTEIN
Bpl_scaf_8342-2.15OS10G0105400 PROTEIN
Bpl_scaf_8342-3.2
Bpl_scaf_8342-3.4OS10G0105400 PROTEIN
Bpl_scaf_8345-0.3
Bpl_scaf_8359-0.2
Bpl_scaf_8370-0.13RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_8370-0.14RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_8387-0.0
Bpl_scaf_8399-0.5E3 UBIQUITIN-PROTEIN LIGASE MYCBP2
Bpl_scaf_8420-0.0
Bpl_scaf_8431-0.6RNA-BINDING PROTEIN
Bpl_scaf_8431-0.7RNA-BINDING PROTEIN
Bpl_scaf_8451-0.0
Bpl_scaf_8461-0.4
Bpl_scaf_8480-0.0
Bpl_scaf_8480-0.5
Bpl_scaf_8480-0.8
Bpl_scaf_8488-0.1
Bpl_scaf_8488-0.5OS10G0105400 PROTEIN
Bpl_scaf_8496-0.1PIRNA BIOGENESIS PROTEIN EXD1
Bpl_scaf_85-0.2
Bpl_scaf_8519-0.11ACTIN
Bpl_scaf_8519-0.12MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_8535-0.13DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_8535-0.14BONUS, ISOFORM C-RELATED
Bpl_scaf_8544-0.0
Bpl_scaf_8544-0.5
Bpl_scaf_8544-0.6
Bpl_scaf_8553-0.11SPORE COAT PROTEIN SP85
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