About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_9007-0.0
Bpl_scaf_9008-0.2
Bpl_scaf_9009-0.2
Bpl_scaf_9010-0.0
Bpl_scaf_9011-0.0SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_9015-0.7UNCHARACTERIZED
Bpl_scaf_9015-0.8NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
Bpl_scaf_9015-1.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_9015-1.1040S RIBOSOMAL PROTEIN S17
Bpl_scaf_9015-2.11
Bpl_scaf_9015-2.12CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Bpl_scaf_9015-2.13-
Bpl_scaf_9015-2.21
Bpl_scaf_9015-3.1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Bpl_scaf_9015-3.6SPERM-ASSOCIATED ANTIGEN 8
Bpl_scaf_9022-0.4
Bpl_scaf_9026-0.8
Bpl_scaf_9026-0.9
Bpl_scaf_9026-1.5
Bpl_scaf_9026-2.6THAP DOMAIN PROTEIN
Bpl_scaf_9026-3.17HEME-BINDING PROTEIN-RELATED
Bpl_scaf_9026-3.18CYCLIN
Bpl_scaf_9026-3.29
Bpl_scaf_9026-3.30UNCHARACTERIZED
Bpl_scaf_9026-3.57HEME-BINDING PROTEIN-RELATED
Bpl_scaf_9026-3.58WD REPEAT-CONTAINING PROTEIN 55
Bpl_scaf_9026-3.6
Bpl_scaf_9026-3.60HEME-BINDING PROTEIN-RELATED
Bpl_scaf_9026-3.7ZINC FINGER PROTEIN
Bpl_scaf_9041-0.0
Bpl_scaf_9041-0.6
Bpl_scaf_9047-0.3
Bpl_scaf_9047-0.4
Bpl_scaf_9054-0.2
Bpl_scaf_9065-0.12TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Bpl_scaf_9065-0.9
Bpl_scaf_9089-0.5OVOCHYMASE-RELATED
Bpl_scaf_9089-0.8LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_9099-0.0BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
Bpl_scaf_910-0.10CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_9106-0.17
Bpl_scaf_9106-0.21
Bpl_scaf_9115-0.2
Bpl_scaf_9138-0.0
Bpl_scaf_9138-0.13DEATH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_9144-0.5
Bpl_scaf_9144-0.6
Bpl_scaf_9152-0.5
Bpl_scaf_9152-0.6
Bpl_scaf_9153-0.1
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