About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_038569-T1
OS493_038570-T1
OS493_038571-T1
OS493_038572-T1
OS493_038573-T1GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4
OS493_038574-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_038575-T1
OS493_038576-T1NACHT, LRR AND CARD DOMAINS-CONTAINING
OS493_038577-T1
OS493_038579-T1ALKALINE PHOSPHATASE
OS493_038580-T1ALKALINE PHOSPHATASE
OS493_038581-T1TRYPSIN-RELATED
OS493_038582-T1
OS493_038583-T1
OS493_038584-T1
OS493_038585-T1
OS493_038587-T1BTB/POZ DOMAIN-CONTAINING
OS493_038588-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_038589-T1
OS493_038590-T1
OS493_038591-T1REGULATOR-RELATED
OS493_038593-T1
OS493_038594-T1
OS493_038596-T1
OS493_038597-T1
OS493_038598-T1
OS493_038599-T1
OS493_038600-T1
OS493_038601-T1WD-40 REPEAT PROTEIN
OS493_038602-T1
OS493_038604-T1
OS493_038605-T1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
OS493_038606-T1ALADIN/ADRACALIN/AAAS
OS493_038607-T1ALADIN/ADRACALIN/AAAS
OS493_038609-T1TYPE I RESTRICTION ENZYME ECOKI R PROTEIN
OS493_038610-T1
OS493_038611-T1
OS493_038612-T1INTELECTIN
OS493_038613-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
OS493_038614-T1
OS493_038615-T1
OS493_038616-T1TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED
OS493_038618-T1
OS493_038619-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_038620-T1
OS493_038621-T1
OS493_038622-T1
OS493_038623-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_038624-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
OS493_038625-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
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