About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_038626-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_038627-T1
OS493_038628-T1
OS493_038629-T1
OS493_038631-T1
OS493_038632-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
OS493_038633-T1
OS493_038634-T1
OS493_038635-T1
OS493_038636-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_038637-T1
OS493_038638-T1
OS493_038639-T1
OS493_038640-T1
OS493_038641-T1CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED
OS493_038642-T1
OS493_038643-T1CYTOCHROME B561-RELATED
OS493_038644-T1
OS493_038645-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
OS493_038646-T1ANKYRIN REPEAT PROTEIN
OS493_038647-T1
OS493_038648-T1ANKYRIN REPEAT PROTEIN
OS493_038649-T1
OS493_038650-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_038651-T1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
OS493_038652-T1
OS493_038653-T1
OS493_038654-T1
OS493_038655-T1
OS493_038656-T1
OS493_038658-T1
OS493_038660-T1
OS493_038661-T1
OS493_038662-T1
OS493_038663-T1
OS493_038664-T1
OS493_038665-T1PHOSPHATIDYLSERINE DECARBOXYLASE
OS493_038666-T1PHOSPHATIDYLSERINE DECARBOXYLASE
OS493_038667-T1
OS493_038668-T1PHOSPHATIDYLSERINE DECARBOXYLASE
OS493_038669-T1PROTEIN PHOSPHATASE
OS493_038670-T1
OS493_038671-T1
OS493_038672-T1
OS493_038673-T1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
OS493_038674-T1
OS493_038675-T1
OS493_038676-T1
OS493_038677-T1
OS493_038678-T1
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