The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000085l.51 | SEC24-RELATED PROTEIN |
PMEG.utg000085l.52 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
PMEG.utg000085l.53 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
PMEG.utg000085l.54 | CHITIN BINDING PERITROPHIN-A |
PMEG.utg000085l.55 | |
PMEG.utg000085l.56 | DNA2/NAM7 HELICASE FAMILY |
PMEG.utg000085l.57 | RETINOBLASTOMA-BINDING PROTEIN 6 |
PMEG.utg000085l.58 | INTERFERON REGULATORY FACTOR |
PMEG.utg000085l.59 | INTERFERON REGULATORY FACTOR |
PMEG.utg000085l.6 | |
PMEG.utg000085l.60 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL |
PMEG.utg000085l.61 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
PMEG.utg000085l.62 | BETA-TUBULIN COFACTOR D |
PMEG.utg000085l.63 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
PMEG.utg000085l.64 | UNCHARACTERIZED |
PMEG.utg000085l.65 | TESTIS-EXPRESSED PROTEIN 33 |
PMEG.utg000085l.66 | THIOREDOXIN, MITOCHONDRIAL |
PMEG.utg000085l.67 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000085l.68 | LIPOCALIN-RELATED PROTEIN-RELATED |
PMEG.utg000085l.69 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000085l.7 | ACTIN |
PMEG.utg000085l.70 | |
PMEG.utg000085l.71 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
PMEG.utg000085l.72 | N-ACETYLTRANSFERASE 9 |
PMEG.utg000085l.73 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
PMEG.utg000085l.74 | DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2 |
PMEG.utg000085l.75 | CGTHBA PROTEIN -14 GENE PROTEIN |
PMEG.utg000085l.76 | TESTIS EXPRESSED GENE 14 |
PMEG.utg000085l.77 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
PMEG.utg000085l.78 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
PMEG.utg000085l.79 | PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED |
PMEG.utg000085l.8 | SYNAPTOTAGMIN |
PMEG.utg000085l.80 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
PMEG.utg000085l.81 | |
PMEG.utg000085l.82 | AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN |
PMEG.utg000085l.83 | POLYCYSTIN FAMILY MEMBER |
PMEG.utg000085l.84 | POLYCYSTIN FAMILY MEMBER |
PMEG.utg000085l.85 | POLYCYSTIN FAMILY MEMBER |
PMEG.utg000085l.86 | POLYCYSTIN FAMILY MEMBER |
PMEG.utg000085l.87 | AMINE OXIDASE |
PMEG.utg000085l.88 | NEPHRIN |
PMEG.utg000085l.89 | |
PMEG.utg000085l.9 | CADHERIN-87A |
PMEG.utg000085l.90 | |
PMEG.utg000085l.91 | RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 |
PMEG.utg000085l.92 | |
PMEG.utg000086l.1 | |
PMEG.utg000086l.10 | - |
PMEG.utg000086l.11 | RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN |
PMEG.utg000086l.12 | NASOPHARYNGEAL EPITHELIUM SPECIFIC PROTEIN 1 |