About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10%28,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000084l.5HEDGEHOG
PMEG.utg000084l.6
PMEG.utg000084l.7PDZ AND LIM DOMAIN PROTEIN ZASP
PMEG.utg000084l.8UNCHARACTERIZED
PMEG.utg000084l.9HISTONE H1
PMEG.utg000085l.1CENTROSOMAL PROTEIN OF 131 KDA
PMEG.utg000085l.10INDOLEAMINE 2,3-DIOXYGENASE
PMEG.utg000085l.11INDOLEAMINE 2,3-DIOXYGENASE
PMEG.utg000085l.12THYMUS, BRAIN AND TESTES-ASSOCIATED
PMEG.utg000085l.13LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
PMEG.utg000085l.14MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
PMEG.utg000085l.15SAD1/UNC-84-LIKE PROTEIN-RELATED
PMEG.utg000085l.16FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE
PMEG.utg000085l.17RIBONUCLEOPROTEIN RB97D
PMEG.utg000085l.18
PMEG.utg000085l.19NUCLEAR RECEPTOR COACTIVATOR 4
PMEG.utg000085l.2METHYLTHIORIBOSE KINASE
PMEG.utg000085l.20CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN
PMEG.utg000085l.21EPITHELIAL MEMBRANE PROTEIN-RELATED
PMEG.utg000085l.22VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT
PMEG.utg000085l.23CARDIOLIPIN HYDROLASE
PMEG.utg000085l.24LIMKAIN B LKAP
PMEG.utg000085l.25
PMEG.utg000085l.26GLYCOSYLTRANSFERASE
PMEG.utg000085l.27
PMEG.utg000085l.28PALMITOYLTRANSFERASE ZDHHC16
PMEG.utg000085l.3ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
PMEG.utg000085l.30CHROMOBOX PROTEIN HOMOLOG 7
PMEG.utg000085l.31HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE
PMEG.utg000085l.32ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 16
PMEG.utg000085l.33UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PMEG.utg000085l.34METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
PMEG.utg000085l.35SERINE/THREONINE PROTEIN PHOSPHATASE
PMEG.utg000085l.36PHD FINGER TRANSCRIPTION FACTOR
PMEG.utg000085l.37UNCHARACTERIZED
PMEG.utg000085l.38RIBOSOMAL PROTEIN S7
PMEG.utg000085l.39SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
PMEG.utg000085l.4SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2
PMEG.utg000085l.40EME1 PROTEIN
PMEG.utg000085l.41TRANSMEMBRANE ANCHOR PROTEIN 1
PMEG.utg000085l.42NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED
PMEG.utg000085l.43SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
PMEG.utg000085l.44UPF0472 PROTEIN C16ORF72
PMEG.utg000085l.45UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PMEG.utg000085l.46UPF0602 PROTEIN C4ORF47
PMEG.utg000085l.47DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11
PMEG.utg000085l.48GENERAL VESICULAR TRANSPORT FACTOR P115
PMEG.utg000085l.49GENERAL VESICULAR TRANSPORT FACTOR P115
PMEG.utg000085l.5ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV
PMEG.utg000085l.50
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