The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000084l.5 | HEDGEHOG |
PMEG.utg000084l.6 | |
PMEG.utg000084l.7 | PDZ AND LIM DOMAIN PROTEIN ZASP |
PMEG.utg000084l.8 | UNCHARACTERIZED |
PMEG.utg000084l.9 | HISTONE H1 |
PMEG.utg000085l.1 | CENTROSOMAL PROTEIN OF 131 KDA |
PMEG.utg000085l.10 | INDOLEAMINE 2,3-DIOXYGENASE |
PMEG.utg000085l.11 | INDOLEAMINE 2,3-DIOXYGENASE |
PMEG.utg000085l.12 | THYMUS, BRAIN AND TESTES-ASSOCIATED |
PMEG.utg000085l.13 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
PMEG.utg000085l.14 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
PMEG.utg000085l.15 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
PMEG.utg000085l.16 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
PMEG.utg000085l.17 | RIBONUCLEOPROTEIN RB97D |
PMEG.utg000085l.18 | |
PMEG.utg000085l.19 | NUCLEAR RECEPTOR COACTIVATOR 4 |
PMEG.utg000085l.2 | METHYLTHIORIBOSE KINASE |
PMEG.utg000085l.20 | CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN |
PMEG.utg000085l.21 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
PMEG.utg000085l.22 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
PMEG.utg000085l.23 | CARDIOLIPIN HYDROLASE |
PMEG.utg000085l.24 | LIMKAIN B LKAP |
PMEG.utg000085l.25 | |
PMEG.utg000085l.26 | GLYCOSYLTRANSFERASE |
PMEG.utg000085l.27 | |
PMEG.utg000085l.28 | PALMITOYLTRANSFERASE ZDHHC16 |
PMEG.utg000085l.3 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 2 |
PMEG.utg000085l.30 | CHROMOBOX PROTEIN HOMOLOG 7 |
PMEG.utg000085l.31 | HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE |
PMEG.utg000085l.32 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 16 |
PMEG.utg000085l.33 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000085l.34 | METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE |
PMEG.utg000085l.35 | SERINE/THREONINE PROTEIN PHOSPHATASE |
PMEG.utg000085l.36 | PHD FINGER TRANSCRIPTION FACTOR |
PMEG.utg000085l.37 | UNCHARACTERIZED |
PMEG.utg000085l.38 | RIBOSOMAL PROTEIN S7 |
PMEG.utg000085l.39 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
PMEG.utg000085l.4 | SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 |
PMEG.utg000085l.40 | EME1 PROTEIN |
PMEG.utg000085l.41 | TRANSMEMBRANE ANCHOR PROTEIN 1 |
PMEG.utg000085l.42 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
PMEG.utg000085l.43 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
PMEG.utg000085l.44 | UPF0472 PROTEIN C16ORF72 |
PMEG.utg000085l.45 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
PMEG.utg000085l.46 | UPF0602 PROTEIN C4ORF47 |
PMEG.utg000085l.47 | DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 |
PMEG.utg000085l.48 | GENERAL VESICULAR TRANSPORT FACTOR P115 |
PMEG.utg000085l.49 | GENERAL VESICULAR TRANSPORT FACTOR P115 |
PMEG.utg000085l.5 | ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV |
PMEG.utg000085l.50 |