The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000075l.9 | SPLICING FACTOR YJU2 |
PMEG.utg000076l.1 | ACID PHOSPHATASE-RELATED |
PMEG.utg000076l.2 | ASPARAGINE SYNTHETASE |
PMEG.utg000076l.3 | SODIUM/NUCLEOSIDE COTRANSPORTER |
PMEG.utg000077l.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
PMEG.utg000077l.10 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
PMEG.utg000077l.11 | QUINONE OXIDOREDUCTASE PIG3-RELATED |
PMEG.utg000077l.12 | CARBOHYDRATE SULFOTRANSFERASE |
PMEG.utg000077l.13 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
PMEG.utg000077l.14 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
PMEG.utg000077l.15 | - |
PMEG.utg000077l.16 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
PMEG.utg000077l.17 | CALCIPRESSIN |
PMEG.utg000077l.18 | METHYLOSOME PROTEIN 50 |
PMEG.utg000077l.19 | EBNA2 BINDING PROTEIN P100 |
PMEG.utg000077l.2 | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1 |
PMEG.utg000077l.20 | SOLUTE CARRIER FAMILY 22 MEMBER |
PMEG.utg000077l.21 | BLOC-1-RELATED COMPLEX SUBUNIT 5 |
PMEG.utg000077l.22 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3 |
PMEG.utg000077l.23 | 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN |
PMEG.utg000077l.24 | 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN |
PMEG.utg000077l.25 | |
PMEG.utg000077l.26 | MAJOR VAULT PROTEIN |
PMEG.utg000077l.27 | O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN |
PMEG.utg000077l.28 | LD44813P |
PMEG.utg000077l.29 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
PMEG.utg000077l.3 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
PMEG.utg000077l.30 | LYMPHOID-RESTRICTED MEMBRANE PROTEIN, JAW1 |
PMEG.utg000077l.31 | |
PMEG.utg000077l.32 | COATOMER SUBUNIT BETA |
PMEG.utg000077l.33 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
PMEG.utg000077l.34 | SEC63 DOMAIN-CONTAINING |
PMEG.utg000077l.35 | SERINE/THREONINE PROTEIN KINASE |
PMEG.utg000077l.36 | HOMOGENTISATE 1,2-DIOXYGENASE |
PMEG.utg000077l.37 | POTASSIUM CHANNEL AKT1 |
PMEG.utg000077l.38 | |
PMEG.utg000077l.39 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 |
PMEG.utg000077l.4 | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1 |
PMEG.utg000077l.40 | RWD DOMAIN-CONTAINING PROTEIN |
PMEG.utg000077l.41 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
PMEG.utg000077l.42 | |
PMEG.utg000077l.43 | |
PMEG.utg000077l.44 | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 |
PMEG.utg000077l.45 | GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN |
PMEG.utg000077l.5 | SUA5 |
PMEG.utg000077l.6 | PROTEASE M1 ZINC METALLOPROTEASE |
PMEG.utg000077l.7 | SPINAL CORD EXPRESSION PROTEIN 4 |
PMEG.utg000077l.8 | SERINE PROTEASE INHIBITOR, SERPIN |
PMEG.utg000077l.9 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED |
PMEG.utg000078l.10 | TRANSCRIPTION FACTOR AP-2 |