The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000086l.13 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
| PMEG.utg000086l.14 | AMP DEAMINASE |
| PMEG.utg000086l.15 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 |
| PMEG.utg000086l.16 | COLLAGEN ALPHA |
| PMEG.utg000086l.17 | |
| PMEG.utg000086l.18 | NOTCH LIGAND FAMILY MEMBER |
| PMEG.utg000086l.19 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| PMEG.utg000086l.2 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000086l.20 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000086l.21 | NEPHRIN |
| PMEG.utg000086l.22 | CONTACTIN 5 |
| PMEG.utg000086l.23 | |
| PMEG.utg000086l.24 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| PMEG.utg000086l.3 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000086l.4 | METHYLTRANSFERASE-LIKE PROTEIN 24 |
| PMEG.utg000086l.6 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000086l.7 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000086l.8 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| PMEG.utg000086l.9 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| PMEG.utg000087l.1 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| PMEG.utg000087l.10 | 26S PROTEASOME REGULATORY SUBUNIT |
| PMEG.utg000087l.11 | UREASE ACCESSORY PROTEIN G |
| PMEG.utg000087l.12 | UREASE |
| PMEG.utg000087l.13 | |
| PMEG.utg000087l.14 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| PMEG.utg000087l.15 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| PMEG.utg000087l.16 | KINESIN-RELATED |
| PMEG.utg000087l.17 | |
| PMEG.utg000087l.18 | CENTAURIN/ARF |
| PMEG.utg000087l.19 | CENTAURIN/ARF |
| PMEG.utg000087l.2 | SPERMIDINE/SPERMINE SYNTHASE |
| PMEG.utg000087l.20 | ENOLASE |
| PMEG.utg000087l.21 | D-GLUCURONYL C5-EPIMERASE |
| PMEG.utg000087l.22 | CATION-TRANSPORTING ATPASE-RELATED |
| PMEG.utg000087l.23 | CASPASE-ACTIVATED DNASE |
| PMEG.utg000087l.24 | |
| PMEG.utg000087l.25 | GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN |
| PMEG.utg000087l.26 | LISH DOMAIN-CONTAINING PROTEIN ARMC9 |
| PMEG.utg000087l.27 | WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1 |
| PMEG.utg000087l.28 | |
| PMEG.utg000087l.29 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| PMEG.utg000087l.3 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| PMEG.utg000087l.30 | POLY [ADP-RIBOSE] POLYMERASE |
| PMEG.utg000087l.31 | POLY [ADP-RIBOSE] POLYMERASE |
| PMEG.utg000087l.32 | PROTEIN LZIC |
| PMEG.utg000087l.33 | |
| PMEG.utg000087l.34 | |
| PMEG.utg000087l.35 | |
| PMEG.utg000087l.36 | PROTOPORPHYRINOGEN OXIDASE |
| PMEG.utg000087l.4 | CYSTEINE PROTEASE FAMILY C1-RELATED |
