The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000089l.54 | |
| PMEG.utg000089l.56 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| PMEG.utg000089l.57 | HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER |
| PMEG.utg000089l.58 | |
| PMEG.utg000089l.59 | BETA1,3-GALACTOSYLTRANSFERASE |
| PMEG.utg000089l.60 | |
| PMEG.utg000089l.61 | CYTOCHROME P450 FAMILY 3 |
| PMEG.utg000089l.62 | SMALL NUCLEAR RIBONUCLEOPROTEIN |
| PMEG.utg000089l.63 | MYOSIN |
| PMEG.utg000089l.65 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| PMEG.utg000089l.66 | - |
| PMEG.utg000089l.67 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| PMEG.utg000089l.68 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| PMEG.utg000089l.69 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| PMEG.utg000089l.7 | PROTEIN SIDEKICK |
| PMEG.utg000089l.70 | RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE |
| PMEG.utg000089l.71 | ATP-DEPENDENT DNA HELICASE |
| PMEG.utg000089l.72 | CELL DEATH ACTIVATOR CIDE |
| PMEG.utg000089l.73 | |
| PMEG.utg000089l.74 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| PMEG.utg000089l.75 | NUCLEOTIDYLTRANSFERASE |
| PMEG.utg000089l.76 | CENTROSOMAL PROTEIN OF 78 KDA |
| PMEG.utg000089l.77 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| PMEG.utg000089l.78 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B |
| PMEG.utg000089l.79 | HL07962P-RELATED |
| PMEG.utg000089l.8 | |
| PMEG.utg000089l.80 | |
| PMEG.utg000089l.82 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| PMEG.utg000089l.83 | |
| PMEG.utg000089l.84 | |
| PMEG.utg000089l.85 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| PMEG.utg000089l.86 | G DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000089l.87 | |
| PMEG.utg000089l.9 | SOLUTE CARRIER FAMILY 2 |
| PMEG.utg000089l.90 | BTB/POZ DOMAIN-CONTAINING |
| PMEG.utg000089l.91 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| PMEG.utg000089l.93 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000089l.94 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000089l.95 | ACID PHOSPHATASE-RELATED |
| PMEG.utg000089l.96 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| PMEG.utg000089l.97 | KINESIN-RELATED |
| PMEG.utg000089l.98 | VOLTAGE-GATED POTASSIUM CHANNEL |
| PMEG.utg000089l.99 | VOLTAGE-GATED POTASSIUM CHANNEL |
| PMEG.utg000090l.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000090l.10 | RNA BINDING PROTEIN |
| PMEG.utg000090l.11 | RNA BINDING PROTEIN |
| PMEG.utg000090l.13 | CONTACTIN 5 |
| PMEG.utg000090l.14 | |
| PMEG.utg000090l.15 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| PMEG.utg000090l.16 |
