The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000092l.50 | INVERTED FORMIN-2 |
| PMEG.utg000092l.51 | FLAVIN MONOAMINE OXIDASE |
| PMEG.utg000092l.52 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
| PMEG.utg000092l.53 | |
| PMEG.utg000092l.54 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
| PMEG.utg000092l.6 | 60S RIBOSOMAL PROTEIN L31 |
| PMEG.utg000092l.7 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| PMEG.utg000092l.8 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
| PMEG.utg000092l.9 | FOS TRANSCRIPTION FACTOR-RELATED |
| PMEG.utg000093l.1 | |
| PMEG.utg000093l.10 | HIV-1 REV BINDING PROTEIN 2, 3 |
| PMEG.utg000093l.11 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| PMEG.utg000093l.12 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000093l.13 | OXIDOREDUCTASE HTATIP2 |
| PMEG.utg000093l.14 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| PMEG.utg000093l.15 | CONDENSIN |
| PMEG.utg000093l.16 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| PMEG.utg000093l.17 | UNCHARACTERIZED |
| PMEG.utg000093l.18 | CAT EYE SYNDROME CRITICAL REGION PROTEIN 2 |
| PMEG.utg000093l.19 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| PMEG.utg000093l.2 | |
| PMEG.utg000093l.20 | OS10G0105400 PROTEIN |
| PMEG.utg000093l.21 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
| PMEG.utg000093l.22 | UNCHARACTERIZED |
| PMEG.utg000093l.23 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
| PMEG.utg000093l.24 | OXYSTEROL-BINDING PROTEIN-RELATED |
| PMEG.utg000093l.25 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| PMEG.utg000093l.26 | VACUOLAR PROTEIN SORTING 26 RELATED |
| PMEG.utg000093l.27 | RHO-GTPASE-ACTIVATING PROTEIN LRG1 |
| PMEG.utg000093l.28 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 |
| PMEG.utg000093l.29 | NUCLEAR PORE GLYCOPROTEIN P62-RELATED |
| PMEG.utg000093l.3 | |
| PMEG.utg000093l.30 | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 |
| PMEG.utg000093l.31 | SOLUTE CARRIER FAMILY 39 |
| PMEG.utg000093l.32 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| PMEG.utg000093l.33 | |
| PMEG.utg000093l.34 | |
| PMEG.utg000093l.35 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000093l.36 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| PMEG.utg000093l.37 | PROTEIN CBG16327 |
| PMEG.utg000093l.38 | PROTEIN CBG16327 |
| PMEG.utg000093l.39 | NUCLEOLAR PROTEIN OF 40 KDA |
| PMEG.utg000093l.4 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| PMEG.utg000093l.40 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| PMEG.utg000093l.41 | ACETYL-COA C-ACYLTRANSFERASE |
| PMEG.utg000093l.5 | NADH-CYTOCHROME B5 REDUCTASE |
| PMEG.utg000093l.6 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| PMEG.utg000093l.7 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| PMEG.utg000093l.8 | CAMK FAMILY PROTEIN KINASE |
| PMEG.utg000093l.9 | RIBOSOMAL PROTEIN S15P/S13E |
