The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000090l.17 | |
| PMEG.utg000090l.18 | |
| PMEG.utg000090l.19 | DOPAMINE BETA HYDROXYLASE RELATED |
| PMEG.utg000090l.2 | |
| PMEG.utg000090l.20 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| PMEG.utg000090l.21 | HL07962P-RELATED |
| PMEG.utg000090l.22 | MYCBP-ASSOCIATED PROTEIN |
| PMEG.utg000090l.23 | GH03947P |
| PMEG.utg000090l.3 | |
| PMEG.utg000090l.4 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| PMEG.utg000090l.5 | PROTEIN SIDEKICK |
| PMEG.utg000090l.6 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| PMEG.utg000090l.7 | |
| PMEG.utg000090l.8 | 80 KDA MCM3-ASSOCIATED PROTEIN |
| PMEG.utg000090l.9 | RAS-RELATED PROTEIN RAB |
| PMEG.utg000091l.1 | PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44 |
| PMEG.utg000091l.10 | CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A |
| PMEG.utg000091l.11 | PROFILIN |
| PMEG.utg000091l.12 | FAMILY WITH SEQUENCE SIMILARITY 228 MEMBER A |
| PMEG.utg000091l.13 | UNCHARACTERIZED |
| PMEG.utg000091l.15 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| PMEG.utg000091l.16 | SYNAPTOTAGMIN |
| PMEG.utg000091l.17 | |
| PMEG.utg000091l.18 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| PMEG.utg000091l.19 | |
| PMEG.utg000091l.2 | |
| PMEG.utg000091l.21 | RNA RECOGNITION MOTIF-CONTAINING |
| PMEG.utg000091l.22 | ZINC FINGER MYM-TYPE PROTEIN |
| PMEG.utg000091l.23 | ZINC FINGER MYM-TYPE PROTEIN |
| PMEG.utg000091l.24 | ZINC FINGER PROTEIN |
| PMEG.utg000091l.25 | COILED-COIL DOMAIN-CONTAINING PROTEIN 58 |
| PMEG.utg000091l.26 | IMPORTIN ALPHA |
| PMEG.utg000091l.28 | COILED-COIL DOMAIN-CONTAINING PROTEIN 81 |
| PMEG.utg000091l.29 | GCIP-INTERACTING PROTEIN P29 |
| PMEG.utg000091l.3 | |
| PMEG.utg000091l.30 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| PMEG.utg000091l.31 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| PMEG.utg000091l.32 | ANDROGLOBIN |
| PMEG.utg000091l.33 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
| PMEG.utg000091l.34 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| PMEG.utg000091l.35 | CUBILIN |
| PMEG.utg000091l.36 | |
| PMEG.utg000091l.37 | D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH |
| PMEG.utg000091l.38 | |
| PMEG.utg000091l.39 | TESTIS EXPRESSED 11 |
| PMEG.utg000091l.4 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| PMEG.utg000091l.40 | |
| PMEG.utg000091l.41 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
| PMEG.utg000091l.42 | PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR |
| PMEG.utg000091l.43 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
