The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000091l.90 | MYOSIN |
PMEG.utg000091l.91 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
PMEG.utg000091l.92 | NADH-CYTOCHROME B5 REDUCTASE |
PMEG.utg000091l.93 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
PMEG.utg000091l.94 | WD REPEAT CONTAINING PROTEIN 3 WDR3 |
PMEG.utg000092l.1 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
PMEG.utg000092l.10 | ACYL-COA SYNTHETASE |
PMEG.utg000092l.11 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000092l.12 | ACROSIN-RELATED |
PMEG.utg000092l.13 | UPF0462 PROTEIN |
PMEG.utg000092l.14 | |
PMEG.utg000092l.15 | GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1 |
PMEG.utg000092l.16 | UNCHARACTERIZED |
PMEG.utg000092l.17 | MORTALITY FACTOR 4-LIKE PROTEIN |
PMEG.utg000092l.18 | 30S/40S RIBOSOMAL PROTEIN S3 |
PMEG.utg000092l.19 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
PMEG.utg000092l.2 | ALDO/KETO REDUCTASE |
PMEG.utg000092l.20 | APOLIPOPROTEIN D |
PMEG.utg000092l.21 | PERIOSTIN-RELATED |
PMEG.utg000092l.22 | PERIOSTIN-RELATED |
PMEG.utg000092l.23 | HL07962P-RELATED |
PMEG.utg000092l.24 | PERIOSTIN-RELATED |
PMEG.utg000092l.25 | LEUCINE RICH REPEAT FAMILY PROTEIN |
PMEG.utg000092l.26 | CYTOCHROME P450 508A4-RELATED |
PMEG.utg000092l.27 | NEPHRIN |
PMEG.utg000092l.28 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
PMEG.utg000092l.29 | CARBONYL REDUCTASE 1-RELATED |
PMEG.utg000092l.3 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
PMEG.utg000092l.30 | CARBONIC ANHYDRASE |
PMEG.utg000092l.31 | UNCHARACTERIZED |
PMEG.utg000092l.32 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
PMEG.utg000092l.33 | TRANSCRIPTIONAL REGULATOR |
PMEG.utg000092l.34 | CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS |
PMEG.utg000092l.35 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
PMEG.utg000092l.36 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
PMEG.utg000092l.37 | DNA HELICASE RECQ FAMILY MEMBER |
PMEG.utg000092l.38 | CYTOCHROME P450 508A4-RELATED |
PMEG.utg000092l.39 | CYTOCHROME P450 508A4-RELATED |
PMEG.utg000092l.4 | RING BOX |
PMEG.utg000092l.40 | NEUROTRANSMITTER GATED ION CHANNEL |
PMEG.utg000092l.41 | NFRKB-RELATED |
PMEG.utg000092l.42 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
PMEG.utg000092l.43 | SAP30 |
PMEG.utg000092l.44 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
PMEG.utg000092l.45 | EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN |
PMEG.utg000092l.46 | COLLAGEN ALPHA |
PMEG.utg000092l.47 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |
PMEG.utg000092l.48 | UNCHARACTERIZED |
PMEG.utg000092l.49 | PROTEIN PHOSPHATASE METHYLESTERASE-1 RELATED |
PMEG.utg000092l.5 | CALRETICULIN AND CALNEXIN |