The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
| Gene ID | Description |
|---|---|
| PMEG.utg000101l.2 | |
| PMEG.utg000101l.3 | ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING |
| PMEG.utg000102l.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| PMEG.utg000102l.10 | ASHWIN |
| PMEG.utg000102l.100 | |
| PMEG.utg000102l.101 | WD40 REPEAT FAMILY |
| PMEG.utg000102l.102 | EH DOMAIN |
| PMEG.utg000102l.103 | |
| PMEG.utg000102l.11 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| PMEG.utg000102l.12 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| PMEG.utg000102l.13 | DUF614 FAMILY PROTEIN-RELATED |
| PMEG.utg000102l.14 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| PMEG.utg000102l.15 | CDC37-RELATED |
| PMEG.utg000102l.16 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 |
| PMEG.utg000102l.17 | NERVE GROWTH FACTOR NGF -RELATED |
| PMEG.utg000102l.18 | ANKYRIN REPEAT FAMILY PROTEIN |
| PMEG.utg000102l.19 | NUCLEOPORIN NUP43 |
| PMEG.utg000102l.2 | NADPH OXIDASE |
| PMEG.utg000102l.20 | UBIQUITIN-CONJUGATING ENZYME E2 |
| PMEG.utg000102l.21 | PROTEIN CBG01349-RELATED |
| PMEG.utg000102l.22 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| PMEG.utg000102l.23 | |
| PMEG.utg000102l.24 | SEC63 DOMAIN-CONTAINING |
| PMEG.utg000102l.25 | SEC63 DOMAIN-CONTAINING |
| PMEG.utg000102l.26 | |
| PMEG.utg000102l.27 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| PMEG.utg000102l.28 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| PMEG.utg000102l.29 | IST1 FAMILY MEMBER |
| PMEG.utg000102l.3 | SULFOTRANSFERASE SULT |
| PMEG.utg000102l.30 | |
| PMEG.utg000102l.31 | |
| PMEG.utg000102l.32 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000102l.33 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
| PMEG.utg000102l.34 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| PMEG.utg000102l.35 | WD REPEAT DOMAIN 9 |
| PMEG.utg000102l.36 | DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER |
| PMEG.utg000102l.37 | EXPRESSED PROTEIN |
| PMEG.utg000102l.38 | NUCLEAR MOVEMENT PROTEIN NUDC |
| PMEG.utg000102l.39 | |
| PMEG.utg000102l.4 | PEPTIDASE M20 |
| PMEG.utg000102l.40 | SMALL ACIDIC PROTEIN-RELATED |
| PMEG.utg000102l.41 | GEO13458P1 |
| PMEG.utg000102l.42 | - |
| PMEG.utg000102l.43 | SOLUTE CARRIER FAMILY 22 MEMBER |
| PMEG.utg000102l.44 | P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN |
| PMEG.utg000102l.45 | EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE |
| PMEG.utg000102l.46 | |
| PMEG.utg000102l.47 | YALI0E30327P |
| PMEG.utg000102l.48 | GERANYLGERANYL PYROPHOSPHATE SYNTHASE |
| PMEG.utg000102l.49 | - |
